Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g144 ATGGTGCAGGCTGTGATTAGAGAGCCACGAATGGGTGCTTCGATTCTTCGCTTGTTCTTTCATGATTGTTTCGTGAATGGCTGTGATGCATCAATACTACTGGACGATACAGCCACATTCACTGGAGAAAAGAATGCTCTTCCGAACCAGAACTCAGTTAGGGGTTTTGAAGTAATTGACACCATTAAAACCCGAGTTGAGGCTGCTTGCAAAGCCACGGTATCTTGTGCAGACATCCTGGCACTAGCAGCACGCGATGGAGTCGTCTTGCTTGGAGGACCTTCTTGGACAGTACCACTTGGGAGAAGAGATGCAAGAACGGCCAACCAGAGTGCAGCAAACAACGATCTTCCAGCGCCATTTGCTAACCTCTCAGCCCTCATCTCCGGTTTTGCTGCCAAAGGTCTAAATGCCGATGATATGACCGCTCTTTTCAGGCGGAAACTCCAACTTGGCCCCCCTTGA 465 49.46 MVQAVIREPRMGASILRLFFHDCFVNGCDASILLDDTATFTGEKNALPNQNSVRGFEVIDTIKTRVEAACKATVSCADILALAARDGVVLLGGPSWTVPLGRRDARTANQSAANNDLPAPFANLSALISGFAAKGLNADDMTALFRRKLQLGPP* 155
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 2459823 2461558 - Vvi12g144 Vvi12g144 772667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g144 154 SUPERFAMILY Heme-dependent peroxidases 2 144 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi12g144 154 PRINTS Haem peroxidase superfamily signature 12 26 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g144 154 PRINTS Haem peroxidase superfamily signature 74 91 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g144 154 PRINTS Haem peroxidase superfamily signature 92 104 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g144 154 ProSitePatterns Peroxidases active site signature. 12 23 IPR019794 GO:0004601
Vvi12g144 154 ProSiteProfiles Plant heme peroxidase family profile. 1 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g144 154 PANTHER PEROXIDASE 1 144 - -
Vvi12g144 154 PANTHER PEROXIDASE 72-RELATED 1 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g144 154 Gene3D - 1 130 - -
Vvi12g144 154 Pfam Peroxidase 4 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g144 154 PRINTS Plant peroxidase signature 14 34 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g144 154 PRINTS Plant peroxidase signature 54 67 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g144 154 PRINTS Plant peroxidase signature 73 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g144 154 PRINTS Plant peroxidase signature 92 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g144 K00430 - vvi:100259249 286.189