Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi12g145 | ATGGCCTCCTTTACCAACTCTTTTGTTGTATTCTCCATCATTTCTCTCCTTGCTTGCTCCATCAATGGTCAGCTTTCGCCTAATTTCTATGCGTCCACTTGCCCTAACGTTCAAAATATTGTGCGGGTTGCAATGAGGCAGGCTGTGATTAGAGAGCCACGAATGGGTGCTTCGATTCTTCGCTTGTTCTTTCATGATTGTTTCGTGAATGGTTGTGATGCATCAATACTACTGGACGATACAGCCACATTCACTGGAGAAAAGAATGCTCTTCCGAACCAGAACTCAGTTAGGGGTTTTGAAGTAATTGACACCATTAAAACCCGAGTTGAGGCTGCTTGCAATGCCACGGTATCTTGTGCAGACATCCTGGCACTGGCAGCACGTGATGGAGTCGTCCAGCTAGGAGGACCCTCTTGGACGGTACCACTTGGGAGGAGAGATGCAAGAACAGCCAGCCAGAGTGCAGCAAACAACGAGATTCCATCGCCATTGGCTAGCCTCTCGGCCCTCATCTCCGGTTTTGCTGCCAAAGGTCTAAATGCCCGTGATATGACCGCTCTGTCAGGTAGCCATACAATAGGCCAAGCTCAGTGCTTCACTTTCCGCTCCCGCATCTACAACGACACCAACATCGACCCCAACTTTGCTGCCACCCGAAGATCTACATGCCCAGTTTCAGGCGGAAACTCCAACTTGGCCCCCCTTGATATACGGACCATGAATAGGTTTGATAACATTTACTACCAAAACCTTATGACTCGGCGTGGGCTTCTCCATTCAGACCAGGAGCTGTTCAACGGTGGGTCTCAGGATGCTTTGGTTAGGACCTATAATGCTAACAATGCCTTGTTTTTCCGAGACTTCGCTGCTGCTATGGTGAAGATGAGCAATATCAGCCCGCTCACTGGAACAAATGGCGAGATCAGAAGCAACTGCAGGGTGCAAAAAAAAAAACCCGTGAACCATCTCTTCTGTTCTACTCTTCTTCTCTTTTGCTCTCTGATTTTCTTCCTTGCTCTAGAATGCATGGTCAGCCCCCCTTCCTCTCTAAGACCGATTGGCAGTCTTCCTGTTCTTTGGCAGCATGCAGCATGTACATCGAATCCTCATGGTACGGCTGCCCCTCTCCTTTATGAACGGTGCGAGAAAATCAGAACACTTACCGGCCCCTTTCTCTGGTGCCCTACTTTTTTAATTCTACGCGTGATCCTCTTCAGTATGGAAAGTGTGGCTGCCAATATGGAATGCATAGCTGCCTTGTCTGTGAAGTTGTGA | 1278 | 48.59 | MASFTNSFVVFSIISLLACSINGQLSPNFYASTCPNVQNIVRVAMRQAVIREPRMGASILRLFFHDCFVNGCDASILLDDTATFTGEKNALPNQNSVRGFEVIDTIKTRVEAACNATVSCADILALAARDGVVQLGGPSWTVPLGRRDARTASQSAANNEIPSPLASLSALISGFAAKGLNARDMTALSGSHTIGQAQCFTFRSRIYNDTNIDPNFAATRRSTCPVSGGNSNLAPLDIRTMNRFDNIYYQNLMTRRGLLHSDQELFNGGSQDALVRTYNANNALFFRDFAAAMVKMSNISPLTGTNGEIRSNCRVQKKKPVNHLFCSTLLLFCSLIFFLALECMVSPPSSLRPIGSLPVLWQHAACTSNPHGTAAPLLYERCEKIRTLTGPFLWCPTFLILRVILFSMESVAANMECIAALSVKL* | 426 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 2463289 | 2469852 | - | Vvi12g145 | Vvi12g145 | 772668 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi12g145 | 425 | ProSitePatterns | Peroxidases active site signature. | 56 | 67 | IPR019794 | GO:0004601 | |
Vvi12g145 | 425 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 184 | 194 | IPR019793 | - | |
Vvi12g145 | 425 | PANTHER | PEROXIDASE | 6 | 315 | - | - | |
Vvi12g145 | 425 | PRINTS | Plant peroxidase signature | 34 | 53 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi12g145 | 425 | PRINTS | Plant peroxidase signature | 58 | 78 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi12g145 | 425 | PRINTS | Plant peroxidase signature | 98 | 111 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi12g145 | 425 | PRINTS | Plant peroxidase signature | 117 | 127 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi12g145 | 425 | PRINTS | Plant peroxidase signature | 136 | 151 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi12g145 | 425 | PRINTS | Plant peroxidase signature | 183 | 195 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi12g145 | 425 | PRINTS | Plant peroxidase signature | 235 | 250 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi12g145 | 425 | PRINTS | Plant peroxidase signature | 251 | 268 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi12g145 | 425 | PRINTS | Plant peroxidase signature | 291 | 304 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi12g145 | 425 | ProSiteProfiles | Plant heme peroxidase family profile. | 24 | 317 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi12g145 | 425 | Gene3D | - | 28 | 314 | - | - | |
Vvi12g145 | 425 | Pfam | Peroxidase | 42 | 280 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi12g145 | 425 | Gene3D | Peroxidase, domain 2 | 162 | 296 | - | - | |
Vvi12g145 | 425 | PANTHER | PEROXIDASE 72-RELATED | 6 | 315 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi12g145 | 425 | PRINTS | Haem peroxidase superfamily signature | 56 | 70 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi12g145 | 425 | PRINTS | Haem peroxidase superfamily signature | 118 | 135 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi12g145 | 425 | PRINTS | Haem peroxidase superfamily signature | 136 | 148 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi12g145 | 425 | PRINTS | Haem peroxidase superfamily signature | 184 | 199 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi12g145 | 425 | PRINTS | Haem peroxidase superfamily signature | 237 | 252 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi12g145 | 425 | CDD | secretory_peroxidase | 24 | 315 | IPR033905 | GO:0004601|GO:0042744 | |
Vvi12g145 | 425 | SUPERFAMILY | Heme-dependent peroxidases | 24 | 315 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi12g145 | K00430 | - | vvi:100264421 | 617.076 |