Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g15 ATGGTGAGGGAGCAAAGGGTCGAGTCTTTCTACACTCGGCTACGCGAATCTGTTTCGGCTTCTTCTTCCTCTCCTCTGCTTGTGTTCCCGTCTACATCGGATGTCGATTCGTTGTGTGCCCTGAAAGTAATTTTCCACGTCCTTGAGTCAGATTCTGTTCGATATGCATGCTATCCAGTTTCATCGTTCAAGGAGATCCATAAATATGCGGGGCCTAGTTTATGCTCATCGGATCAGCCTGTTTCGATCCTCCTTTTAAACTGGGGATGTCAACGGGATTTGCGAAGGGTTCTGAATTTGGGGCCTGCTGCTCTTCAGCTCCTTAGGAAGCTGACAAGGGAGTACTATAATATGGGTACTTTCCATGGTAAGCCTTCTGGGTGTTTGATGTTTGAATTGGCCCATTCTCTGAGAAAGAACACAAATGAATTGCTATGGTTGGCTTGTGTTTCCTTAACCGATCAGTTTGTTCACGAGAGGCTAACAGATGAGAGATACCAAGCTGGGGTTATGGAGCTTGAGCAACATATCAACAGCTCAGGTAATTTGGACACTATTACTTCGGTGACTCTTAAAGATGGAACAAAGATTCGAGCACCTGATTCATCTAGAATTGCCTATGAAGATGAACCAAGACTAATGTTGTTACAAGAGTGGAATTTGTTTGATTCTATGTTGTGTTCTTCCTACATTGCCACTAAATTGAAAACTTGGAGTGACAATGGGATGAAAAAGCTCAAGCTGCTTCTTGCTCGAATGGGATTTGCCCTGGTGGATTGCCAGCAGAAATTTCAATACATGAATCTGGAAGTAAAAAGGAAGATGAAAGATGAGTTTGAACGATTCCTACCTGAGTATGGACTCACAGATTTCTACTACAGAAGTTTCTTGCGGCTACATGGGTATAGTTCAAGGGTTTCTGCAGCAGATGTGGTATATGGGGTTACTGCATTGCTCGAGTCATTCGTGAAATCAGATGGCTCTTCTGCTTCCAAGCAGTTTGGGGTGGCTTTTGATGCATTGTCCTTGAGCAATCTAGATAAATTGAGAAATGGGATGCAGTATGCAATTAGGATACAGAGGGCGATTCTTCGACAAGGAAGTGCAGCAATAACTAAGAGTGGTGCTATAAGGAGTGGAAGAAAATTCAGGTGGGTGAAGCTTGAGGATTCAGCAGATACAAAGCTTTTAGGGTACCCACAAGCATTAACCAAATTCTGTTACTTTCTGATGGATGCCTTGCGAGAGAAGGGAGCAAAAATGAAGCCTTTGCTTTGTGCTTGCTTATCACAAGAACCAAATAAGGTATTAATAGTGGGAGTTTGTGGGAAGCCACGACTTGGGGCAGTTCAAGGAAATGCATTTGGGATTGCATTTAGAAATGCAGCTGAAGAGATCGGAGCTGATTTCTTCCATGAGTTGTTTGAATCTTCATGGATTGTTTTGGATGCAGTTGCAGTTAATTCCTTTATGATCAGGTTAACCGAGAAGCTTTGA 1497 43.02 MVREQRVESFYTRLRESVSASSSSPLLVFPSTSDVDSLCALKVIFHVLESDSVRYACYPVSSFKEIHKYAGPSLCSSDQPVSILLLNWGCQRDLRRVLNLGPAALQLLRKLTREYYNMGTFHGKPSGCLMFELAHSLRKNTNELLWLACVSLTDQFVHERLTDERYQAGVMELEQHINSSGNLDTITSVTLKDGTKIRAPDSSRIAYEDEPRLMLLQEWNLFDSMLCSSYIATKLKTWSDNGMKKLKLLLARMGFALVDCQQKFQYMNLEVKRKMKDEFERFLPEYGLTDFYYRSFLRLHGYSSRVSAADVVYGVTALLESFVKSDGSSASKQFGVAFDALSLSNLDKLRNGMQYAIRIQRAILRQGSAAITKSGAIRSGRKFRWVKLEDSADTKLLGYPQALTKFCYFLMDALREKGAKMKPLLCACLSQEPNKVLIVGVCGKPRLGAVQGNAFGIAFRNAAEEIGADFFHELFESSWIVLDAVAVNSFMIRLTEKL* 499
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 226535 228314 - Vvi12g15 Vvi12g15 772538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g15 498 PANTHER - 104 498 - -
Vvi12g15 498 PANTHER - 1 104 - -
Vvi12g15 498 PANTHER CDC45-RELATED PROTEIN 104 498 IPR003874 GO:0006270
Vvi12g15 498 PANTHER CDC45-RELATED PROTEIN 1 104 IPR003874 GO:0006270
Vvi12g15 498 Pfam CDC45-like protein 28 102 IPR003874 GO:0006270
Vvi12g15 498 Pfam CDC45-like protein 109 321 IPR003874 GO:0006270
Vvi12g15 498 Pfam CDC45-like protein 325 497 IPR003874 GO:0006270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g15 K06628 - vvi:100253995 784.637