Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g218 ATGTTCACCAATCTTCAATTTGCTAGGAAGGAGAGTCGAACCAGTGATGTTGCAGTGTTGGAGGAGCAAGTGCATCAGATGCTTCGCGAGTGGAAAGCTGAGCTCAATGAGCCGTCTCCAGCTTCTTCTTTGCTTGGTGGTAGTCTTGGGTCATTTTCAGCAGATATTAACCGTTTGTTGCAGCGCTGTGAGGAGGAAGATGATGCAACTAGTGCATTAGTAGAACCTGCAGCATTGAAGCCTGAGCCTGATGTTCAAAGTCTTCAGGCAGGCAATTCGATGGCCTTTCAAGAGGACTATCTCGTGAATCATGCATCACAAGACCATTGCCTTCTGGGGTTTGATCAATGCAAAGGCTCTGCATTTGGGTTGCAAAATACAGTGGCTAATAACTTGGAGATGACAACTCAGTCAGATTATAATCAGTTTGATATGCATCAAGACTTTGACCATGAGCTTTTTATTGGCCCCATGGGGCTGTGTGGACAGGATGGTGTGCCCAACATTCCTGGCTTGTTGCCAAACATCTGCCCTCCACCATCTGCTTTCTTAGGGCCAAAATGTGCTCTCTGGGATTGTCCCAGGCCTGCTCAAGGTTCTGAATGGTGTCAGGATTATTGCAGTAGCTTTCATGCGAGTCTAGCATTAAATGAAGGCCCCCCAGGTATGACTCCAGTTCTGCGACCTGGGGGCATTGGTTTGAAGGATGGTCCTCTATTTGCTGCACTTAGTGCAAAGACACAGGGAAAGGATGTTGGCATCCCTGAATGTGAGGGGGCTGCAACTTCGAAATCTCCATGGAATGCTCCTGAGTTGTTTGATCTTTCTGTTCTTGAAGGTGAAATAATTAGGGAGTGGCTCTTTTTTGATAAGCCTCGTAGAGCATTTGAGAGTGGGAATAGGAAGCAGAGGTCATTGCCAGATTACAGTGGACGTGGTTGGCATGAATCAAGGAAACAAGTGATGAAGGAATTTGGGGGATTGAAGAGGTCTTATTACATGGATCCGCAACCTCTAACCTGTTTTGAGTGGCATCTTTATGAATATGAGATCAACCACTGTGATGCTTGTGCATTATATAGGTTAGAACTCAAGCTCGTTGATGGAAAGAAGAGTCCCAAGGGAAAGGTGATAAATGATTCACTTGCTGATCTGCAGAAGCAGATGGGAAGGCTTACTGCTGAGTTTCCTACTGATGTCAAACGCTCTACCAAGGGCAGGACAAAGGTTAATAAAAAGGTTGGTGCCAGAAATATTTATTCTGCTCCTAATCTCATGACTCCTACAGCTGAAACTTTCAGTTATGGGCTAAGTGGATCATACAATTATCTTCCTGAGAATTTGGCTGACTATTATGTTTATCTTGTGCCTGTTCATGTGCAACTTGAGTTATTCCTGTGTGTTATGTTCTCTCTCAAAGATGACATATTTGGTGAAATATGA 1443 44.56 MFTNLQFARKESRTSDVAVLEEQVHQMLREWKAELNEPSPASSLLGGSLGSFSADINRLLQRCEEEDDATSALVEPAALKPEPDVQSLQAGNSMAFQEDYLVNHASQDHCLLGFDQCKGSAFGLQNTVANNLEMTTQSDYNQFDMHQDFDHELFIGPMGLCGQDGVPNIPGLLPNICPPPSAFLGPKCALWDCPRPAQGSEWCQDYCSSFHASLALNEGPPGMTPVLRPGGIGLKDGPLFAALSAKTQGKDVGIPECEGAATSKSPWNAPELFDLSVLEGEIIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMKEFGGLKRSYYMDPQPLTCFEWHLYEYEINHCDACALYRLELKLVDGKKSPKGKVINDSLADLQKQMGRLTAEFPTDVKRSTKGRTKVNKKVGARNIYSAPNLMTPTAETFSYGLSGSYNYLPENLADYYVYLVPVHVQLELFLCVMFSLKDDIFGEI* 481
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 3462914 3470985 - Vvi12g218 Vvi12g218 772741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g218 480 PANTHER TRANSCRIPTION FACTOR VOZ1 1 453 IPR039277 GO:0006355|GO:0048578
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi10g159 Vvi12g218 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13787 None None None None Vvi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g218 - - vvi:100262658 929.087