Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g240 ATGAACCCAGAACCAGCTTCACTCGAAGAAACACCAACATGGGCTGTTTCAATTTTTTGTTTGGCATTCTTTGTTATCTCGGGCACCATCGATGCTGGTCTTCATAGATTAACCAAGTTTCTAAAGAAAAGGAAAAGGAAAGCCCTCAATAGGGCCTTGGGAAGGATCAAAATAGAAATGATGATACTGGGCTTCATATCCTTGCTTCTTACAATATCCGAAGAAACACCCATATCTAAAATCTGTGTCCCCCAATCCATGGCAAACTCTTTTCTTCCCTGCAAGGATGCACCTGAGATGGTAGGATCAGCTGTTTCATCGGACACAGAAGTCTCAGGATCGACATCCAACACTACTACCCCTCCTACACATGAAACCCCAGATGATGATTCCTACTTACTACTAACAATTTTGTTTTCTTTGGGTCTGATCATTCAGGGAAAGGTTTCTCTGGTGTCAAGAGAAGGGATCGAGCAGCTCAATATCTTTATCTCAGTGTTGGCTGTCTTCCATGTTCTCTACTGTGTACTCACAATGTGTCTTGGGATAGCCAAGATGAGGAAATGGAAAGCATGGGAGAAGGAGACACAAACTCTTGAGTATCAGATTGCCAATGATCCAATGAGGTTCAGGTTCACGCGCCAAACGTCATTTGGGCGACGACACTTGAAGTTCTGGAGTGATTATCCTCTCTTAATTTGGCCTGTTTGTTTGGTTAGACAATTCACTGGCCCAGTTTTGAAAGCTGATTACTTCACTCTCAGAAATGGATTCATCATGGCCCACTTGGCCCAAGGAAGCAATTTCAACTTCCAAAAGTTCCTTTCCAGAGCTTTTGACAAAGATTTTGAGCAGGTGGTTGGATTCAGCTTTTGGATATGGATCTACTCCATACTTTTCATATTTTTCAGTGCACATGGGTTCTATAACTACTATTGGCTACCTTTTATTCCTCTGCTGATTATTCTGGTTGTGGGGACAAAGCTGGGAGTTGTGATAACCACAATGTGTTTGGCGAGTTCTAATGAGAATGATGTGATTCGAGGGACCTTTCTTGTGAAGCCTCATGATGATTTATTCTGGTTTGGAAGACCTAAGTGGCTTCTCCATCTCCTCCAATTTGTCCTATTCCAGAACTCATTTCAGCTGGCATTCTTCGCGTGGACATGGTATGAGTATGGCCTAAGATCTTGCTTCAACCGAGGGACCGAGGACATTGCATTAAGGATTGCTATGGGCGTGGTTGTTCAGTTCCTATGCGGTTATGTGACCCTCCCTCTTTATGCGCTTGTCACACAGATGGGTTCTCAAATGAAACGAGAGGTGTTCACAGAGAGAGTAGCTAAGGGTCTCAGACACTGGCACAGCACTGCAAGGAAAAACCTTTCAAGGGATAGATCCACTTCAACCAGACCCTCACCGAGGACTTCTTTTTCAGATGGACAAACCTTATACTTGCCCCAGCATGACCACCTCCATTCCTCAGCAGCCACGAGTTCTCTTGCAAGCCCTGAAATCTCAGAAGAAACTGTACAGCCCGACACCCCCCCTCCCCCAGCTGAGACAAGCTTCTCAACTAATCCAGAAATCACTGAAGTGGAAGTGCAGTCCAAGATCATCACCAGAGGAAGCTATGACGGTGAGATCTCTTTTGCTAGCACCTGGAAAGTCCAGTAA 1677 44.72 MNPEPASLEETPTWAVSIFCLAFFVISGTIDAGLHRLTKFLKKRKRKALNRALGRIKIEMMILGFISLLLTISEETPISKICVPQSMANSFLPCKDAPEMVGSAVSSDTEVSGSTSNTTTPPTHETPDDDSYLLLTILFSLGLIIQGKVSLVSREGIEQLNIFISVLAVFHVLYCVLTMCLGIAKMRKWKAWEKETQTLEYQIANDPMRFRFTRQTSFGRRHLKFWSDYPLLIWPVCLVRQFTGPVLKADYFTLRNGFIMAHLAQGSNFNFQKFLSRAFDKDFEQVVGFSFWIWIYSILFIFFSAHGFYNYYWLPFIPLLIILVVGTKLGVVITTMCLASSNENDVIRGTFLVKPHDDLFWFGRPKWLLHLLQFVLFQNSFQLAFFAWTWYEYGLRSCFNRGTEDIALRIAMGVVVQFLCGYVTLPLYALVTQMGSQMKREVFTERVAKGLRHWHSTARKNLSRDRSTSTRPSPRTSFSDGQTLYLPQHDHLHSSAATSSLASPEISEETVQPDTPPPPAETSFSTNPEITEVEVQSKIITRGSYDGEISFASTWKVQ* 559
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 3714209 3718236 + Vvi12g240 Vvi12g240 772763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g240 558 MobiDBLite consensus disorder prediction 107 126 - -
Vvi12g240 558 PANTHER MLO-LIKE PROTEIN 1 1 552 IPR004326 GO:0006952|GO:0016021
Vvi12g240 558 MobiDBLite consensus disorder prediction 107 127 - -
Vvi12g240 558 MobiDBLite consensus disorder prediction 459 482 - -
Vvi12g240 558 MobiDBLite consensus disorder prediction 496 510 - -
Vvi12g240 558 MobiDBLite consensus disorder prediction 496 532 - -
Vvi12g240 558 MobiDBLite consensus disorder prediction 467 482 - -
Vvi12g240 558 Pfam Mlo family 7 475 IPR004326 GO:0006952|GO:0016021
Vvi12g240 558 PANTHER MLO-LIKE PROTEIN 1 552 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi10g152 Vvi12g240 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g240 K08472 - vvi:100259221 1001.5