Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g25 ATGGGAGAGAAGAAAAGAGTGTGTGTTACAGGTGCCGGGGGATATGTAGCTTCATGGGTTGTAAAACTTTTACTCTCTAAGGGTTTCATTGTTCATGGAACTGTCAGATACCCATATGACGAAAGGAATAGCCATCTGAAAAAGTTGGAGAAGGCTTCAGAGAATTTGAAGCTGTTCAAGGCAGACTTGATGGACTTCCAAGGCCTTTTCGCTGCTACTGATGGTTGCACTGGGGTTTTCCATATTGCCAGCCCTGTTCCTTCTGCCAAAGTGTCCAATCCCCAGCTGGAAGTGGTAGAACCTGCTGTAATTGGTACACGCAATATTATAAAGGCATGTGAGATGGCCAAAGTGAAGAAACTTGTGGTAGTTTCATCTCTTGCTGCAGTTGTTCTCAACCCAAAATGGCCTAAGGATCGTCCCAAGGATGAGGAATGTTGGTCCGACCCTGAATTTTGTAAGACAATTGAGTACCCTTATTTCCTTTCGAAAACACTAGCGGAGAGTGAAGCTTTGGAGTATGCAAAGACAAGTGAATTCAACATTGTAACAGTTTGTCCATCCCTTGTATTGGGACCCATGTTGCAGTCGACACTAAATGCCACTAGCGCCTTTCTCTTATCATATTTGAAAGATGGACATGAATCAGTAGAAAACAAAGATCGTCCCGTCATCGATGCACGTGATTTGGCTGAAGCGATTCTGCTAGTATATGAGAAACCTGAGGCACATGGAAGATATATATGCTCATCATATACAATATCAACACAAGAGTTAGTAGAAAAGCTGAAGAGCATGTATCCTAATTATAGTTATCCTAAAAGCTACATTGAGGGAGAGGAACATTTGAAGCTAAGTTCACAGAAGTTGCAGAGTTTGGGATGGAAGTATAGGCCACTGGAAGAGACACTTGTGGATGCTGTTAAAAGCTTTGAAGAGAAGGGCTTCTTGCCTAAGCACTAA 963 42.58 MGEKKRVCVTGAGGYVASWVVKLLLSKGFIVHGTVRYPYDERNSHLKKLEKASENLKLFKADLMDFQGLFAATDGCTGVFHIASPVPSAKVSNPQLEVVEPAVIGTRNIIKACEMAKVKKLVVVSSLAAVVLNPKWPKDRPKDEECWSDPEFCKTIEYPYFLSKTLAESEALEYAKTSEFNIVTVCPSLVLGPMLQSTLNATSAFLLSYLKDGHESVENKDRPVIDARDLAEAILLVYEKPEAHGRYICSSYTISTQELVEKLKSMYPNYSYPKSYIEGEEHLKLSSQKLQSLGWKYRPLEETLVDAVKSFEEKGFLPKH* 321
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 443608 459784 - Vvi12g25 Vvi12g25 772548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g25 320 Gene3D - 1 320 - -
Vvi12g25 320 Pfam NAD dependent epimerase/dehydratase family 7 243 IPR001509 -
Vvi12g25 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 312 IPR036291 -
Vvi12g25 320 PANTHER REDUCTASE, PUTATIVE-RELATED 3 318 - -
Vvi12g25 320 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 318 - -
Vvi12g25 320 CDD FR_SDR_e 7 295 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g25 - - vvi:100262473 623.624