Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g252 ATGGGTGAGGTGTGGGGTATGGAAATAATGGCTTCTAGGCATTTTGGTGATATCAAAGTGAATGTGCCCTTCTTATATAAAGGATCGAGCAAGATTTTAGAATTGCATTTTCTCGAGAAACAATTAGAGAAAAAGGGCTATTATTTTAAAGCTTTGAAAGAAATGGAGGAAGCTACCAATGGGGAACCAAATGAAGAGTTTTTGAAAATTAAGAAAGGGTTGTTGCAAAGTGACGAGTTACTTCAGTATATTTTGGAGACTAGTGTGTATCCAAGGGAGCCACAACCTCTCAAAGAAATAAGGGATGCAAGTGCACACCATCAAAAGAAGATGATGCTGACAACACCTGATGCTGGACAATTAATGGTCTTGCTCTTAAAGCTTATTAATGCAAAGAAGACAATTGAGATTGGAGTATTCACTGGATATTCTCTTCTTCTTACTGCTATTTCAATACCTGATGATGGCAAAATAATAGCCATTGATATAGATCGAGAGGCATTTGAACTAGGGTTTCCCATTATCGAAAAGGCTGGTGTGCAACATAAAATCGACTTTATCGAGGCTCCTGGTCTTGAAGTGCTTGATAGACTCTTAGAAGATCCCAATAATGAAGACTCGTTCGATTATGTTTTTGTGGATGCGGACAAGGATAACTATATAAACTACCACGAGAAGTTGATGAAGTTGGTGAAGATTGGTGGATTAATTCTATATGATAATACACTTTGGTTCGGAACAGTAGCCTTACCAAACTGTTTGGTTCCTGAGAAAATGAAGTATAATAGAGATCATATTATCAAGTTTAACAAGGCCTTGTCAGATGATTCCCGAATACAAATATCACAAGTCCCGGTTGGTGATGGACTCACAATATGTCGTCGCCTTTACTAA 894 37.81 MGEVWGMEIMASRHFGDIKVNVPFLYKGSSKILELHFLEKQLEKKGYYFKALKEMEEATNGEPNEEFLKIKKGLLQSDELLQYILETSVYPREPQPLKEIRDASAHHQKKMMLTTPDAGQLMVLLLKLINAKKTIEIGVFTGYSLLLTAISIPDDGKIIAIDIDREAFELGFPIIEKAGVQHKIDFIEAPGLEVLDRLLEDPNNEDSFDYVFVDADKDNYINYHEKLMKLVKIGGLILYDNTLWFGTVALPNCLVPEKMKYNRDHIIKFNKALSDDSRIQISQVPVGDGLTICRRLY* 298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 3887615 3892967 - Vvi12g252 Vvi12g252 772775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g252 297 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 73 296 IPR002935 GO:0008171
Vvi12g252 297 Pfam O-methyltransferase 86 296 IPR002935 GO:0008171
Vvi12g252 297 PANTHER O-METHYLTRANSFERASE-RELATED 63 296 - -
Vvi12g252 297 Gene3D Vaccinia Virus protein VP39 66 297 IPR029063 -
Vvi12g252 297 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 77 295 IPR029063 -
Vvi12g252 297 PANTHER METHYLTRANSFERASES SUPERFAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 63 296 - -
Vvi12g252 297 CDD AdoMet_MTases 135 239 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g252 K00588 - vvi:100266060 486.493