Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g270 ATGAATGGAAGGGAAATTCTCCAGAAGATCAGTGTGAAGGTTGGGTTAGGTTCATCCACAGCTGACACGGGGAAAGGCAAAAGCAAGATGTCGAAGCATATAACGCATGGATTTCACTTGGTGAAAGGCAAATCAAATCATGAAATGGAAGATTGTTTGGTTTCTGAATTCAAGCAAGTGGAAGACCATGAGTTGGGTTTATTTGGAATATTCGATGGGCATTTGGGCCATGATGTTTCAAATTACTTGAAAACTCATCTGTTTGACAATATTCTGAAGGAGCATACTTTCTGGACCGAAACAGAGAATGCTATAAAGAGAGCTTACCGTAAAACTGACATTGAGATACTGGACAAATCATTGTACTTGGGAAGAGGAGGGTCAACTGCAGTAACAGCAATACTAATCAATGGTGAGAGGTTGGTAGTGGCAAATGTGGGAGATTCTCGGGCTGTTATATGCAAGAATGGTGAGGCTAAACAGCTATCAGTTGATCATGAGCCAAGCAAGGAAAGAACGATGATTGAAAGGCGGGGTGGTTTTGTATCAAACCTTCCAGGTGATGTACCACGTGTTGACGGACAACTTGCAGTGGCAAGGGCATTTGGTGATAAGAGCTTGAAGCTACACCTTAGCTCAGAACCAGATGTGGCAGTGGAGCCCATAACTACTGGAACAGAGTGCATTATTCTGGCAAGTGATGGCTTATGGAAGGTGATGTCAAACCAGGAGGCGGTGGATTGCATCAAACACATAAAGGATGCTCAGTCAGCAGCAAAGCGATTGACTGACGAGGCTCTTTCTAAGAAAAGCAAGGATGATATCTCCTGCATTGTAGTAAAGTTTCAGTGA 852 43.31 MNGREILQKISVKVGLGSSTADTGKGKSKMSKHITHGFHLVKGKSNHEMEDCLVSEFKQVEDHELGLFGIFDGHLGHDVSNYLKTHLFDNILKEHTFWTETENAIKRAYRKTDIEILDKSLYLGRGGSTAVTAILINGERLVVANVGDSRAVICKNGEAKQLSVDHEPSKERTMIERRGGFVSNLPGDVPRVDGQLAVARAFGDKSLKLHLSSEPDVAVEPITTGTECIILASDGLWKVMSNQEAVDCIKHIKDAQSAAKRLTDEALSKKSKDDISCIVVKFQ* 284
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 4074993 4078107 - Vvi12g270 Vvi12g270 772793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g270 283 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 283 - -
Vvi12g270 283 SUPERFAMILY PP2C-like 31 282 IPR036457 -
Vvi12g270 283 Gene3D - 30 283 IPR036457 -
Vvi12g270 283 PANTHER PROTEIN PHOSPHATASE 2C 1 283 IPR015655 GO:0004722|GO:0006470
Vvi12g270 283 CDD PP2Cc 42 282 IPR001932 -
Vvi12g270 283 ProSiteProfiles PPM-type phosphatase domain profile. 35 282 IPR001932 -
Vvi12g270 283 Pfam Protein phosphatase 2C 45 275 IPR001932 -
Vvi12g270 283 SMART PP2C_4 30 280 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi12g270 Vvi19g191 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g270 K17506 - vvi:100247283 565.074