Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g32 ATGGCTGAGAAAGAAGAGAAGGAAAGGGTGTGTATCACAGGTGCAGGAGGTTACATAGCTTCATGGGTTGTCAAGCTTCTGCTTTCAAAGGGTTTTATTGTTCATGGAACTGTCAGAGAGCCATGTGATGGAAAGAACAGTCATCTGAAAAAATTGGAGAAGGCTTCAGAGAATTTGAAACTGTTCAAGGCAGACTTGTTGGACTACGATGGCCTTTGTGCTGCCATTGATGGTTGCACTGGAGTCTTCCATATTGCCAGCCCTAATCTTTACCCCAAAGTATCCAATCCCCAGGCAGAAGTGGTAGAGCCTGCTGTAGTGGGTACGATAAATATACTAAAGGCATGTGAGACGGCCAGAGTGAAGAAAGTTGTGGTAGTGTCATCTGTTGCTGCAGTCATCCTCAACCCAAGCTGGCCTAAGGATCGTCCAAAGGATGAAGAATGCTGGTCTGACCCTGAGATTTGTAAGGCACCCGAGAACTATTATTTCCTATCGAAAACACTGGCAGAGAGTGAAACTTGGAAGCATGCAAGGACAAGTGAATTGGACATTGCAACAGTTTGTCCATCCTTTGTTTTCGGGCCCATGTTGCAACCCACACTGAATGCCAGCAGCTACGTTCTCTTAACATATTTGAAAGATGGACCTGAATCCGTGGAAAATAAAGATCGTCCTATTATTGATGTTCGTGATTTAGCTGAAGCAATTCTTTTGGTATATGAGAAACCTGAGGCACAAGGAAGATACATATGTTCATCATATACAATATCAACACAAGAATTAGTAGAGAAGTTGAAGAGTATGTATCCTAATTACAATTATCCTAAAAGCTACACTGCAGTGGAGGGTTTGAAGCTAAGTTCGGAGAAGTTGCAGGGTTTGGGATGGAAGTATCGGCCACTAGAAGAGACTCTTGTGGATGCTGTTAAAAGCTTTCAAGAGAATGGCTTCTTGCCAAAGCACTAG 969 43.24 MAEKEEKERVCITGAGGYIASWVVKLLLSKGFIVHGTVREPCDGKNSHLKKLEKASENLKLFKADLLDYDGLCAAIDGCTGVFHIASPNLYPKVSNPQAEVVEPAVVGTINILKACETARVKKVVVVSSVAAVILNPSWPKDRPKDEECWSDPEICKAPENYYFLSKTLAESETWKHARTSELDIATVCPSFVFGPMLQPTLNASSYVLLTYLKDGPESVENKDRPIIDVRDLAEAILLVYEKPEAQGRYICSSYTISTQELVEKLKSMYPNYNYPKSYTAVEGLKLSSEKLQGLGWKYRPLEETLVDAVKSFQENGFLPKH* 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 625520 627955 - Vvi12g32 Vvi12g32 772555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g32 322 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 314 IPR036291 -
Vvi12g32 322 CDD FR_SDR_e 10 297 - -
Vvi12g32 322 PANTHER REDUCTASE, PUTATIVE-RELATED 1 320 - -
Vvi12g32 322 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 1 320 - -
Vvi12g32 322 Gene3D - 1 322 - -
Vvi12g32 322 Pfam NAD dependent epimerase/dehydratase family 10 247 IPR001509 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g32 - - vvi:100264246 644.039