Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g412 ATGGTGCCACGTCTTTCCATTTCACAGTCCCACATCGCTGTCACATTCACTGCCTCCACATATCATCACCAAGATTCGACAGATATTTATTTAACCTTTCCCCTCTTGGATCCCAAACTGCCTACCACACACCGTTTCTTCTCCTGTAGAATCATGTTGTCTTCCACGGTCATGAGCGTCTCGCCGGGAGTCCCGACGCCCTCGTCTCTAACTCCACCGTCTCCTCCCTCGTCCTCCCCCGTTCGCGCGATTCCTGGCAGCTACGGCTGGCCTGTGCTCGGCCCGATCGCCGACCGCCTCGACTACTTCTGGTTCCAGGGCCCGGAGACGTTCTTCCGGAAGAGGATCGACAAGTACAAGAGCACCGTGTTCCGTACCAACGTCCCTCCGTCGTTCCCCTTCTTCGTCGGTGTCAATCCTAACGTAATCGCCGTCCTCGATTGCAAATCCTTCTCCTTTCTCTTTGATATGGATGTTGTCGAGAAGAAGAATGTCCTCGTCGGCGACTTCATGCCCAGCGTCAAGTACACCGGCGACATTCGAGTCTGTGCCTATCTCGACACCGCCGAGACCCAACACGCCAGGGTAAAGAGCTTTGCCATGGACATTCTGAAACGGAGTTCCAGCATCTGGGCAAGCGAGGTCGTGGCCAGCCTGGACACCATGTGGGACACCATCGACGCCGGCGTCGCCAAGAGCAACAGCGCCAGTTACATCAAGCCTCTCCAGCGCTTCATCTTCCATTTCCTAACTAAATGCCTTGTTGGCGCGGATCCCGCTGTGTCGCCGGAAATTGCGGAGTCTGGCTACGTCATGCTCGACAAATGGGTTTTCCTCCAGCTCCTCCCCACCATCAGCGTCAACTTCCTGCAACCACTCGAAGAGATCTTCCTCCACTCTTTCGCTTACCCATTCTTCCTCGTCAAAGGAGACTACAGAAAACTCTACGACTTCGTCGAACAACACGGCCAAGCCGTGCTTCAAAGAGGCGAAACCGAGTTCAACCTCTCCAAAGAAGAAACCATCCACAACCTCCTCTTCGTCCTCGGCTTCAACGCCTTCGGTGGCTTCACCATCTTCTTCCCATCTCTCCTCAGCGCTCTTAGCGGCAAACCGGAGTTACAGGCCAAACTGAGAGAAGAGGTCAGATCAAAGATCAAGCCGGGAACAAATCTAACCTTTGAATCGGTTAAAGACTTGGAACTAGTCCACTCCGTCGTGTACGAAACTCTCCGCCTCAACCCGCCCGTCCCACTCCAATACGCTCGAGCCAGAAAGGACTTTCAACTGAGTTCACACGACTCAGTTTTTGAGATAAAGAAGGGAGATCTGCTTTGCGGGTTCCAGAAGGTGGCGATGACAGACCCGAAGATCTTCGACGACCCGGAAACTTTCGTACCGGACCGGTTTACGAAAGAGAAGGGGCGGGAGTTACTGAATTATCTCTTCTGGTCGAACGGGCCCCAGACCGGTTCACCCAGCGACAGGAACAAGCAGTGCGCGGCCAAGGACTATGTCACCATGACCGCTGTCCTATTCGTGACTCACATGTTTCAGCGCTACGATTCTGTCACGGCTAGCGGTTCTTCTATCACCGCCGTTGAGAAAGCTAACTGA 1617 54.05 MVPRLSISQSHIAVTFTASTYHHQDSTDIYLTFPLLDPKLPTTHRFFSCRIMLSSTVMSVSPGVPTPSSLTPPSPPSSSPVRAIPGSYGWPVLGPIADRLDYFWFQGPETFFRKRIDKYKSTVFRTNVPPSFPFFVGVNPNVIAVLDCKSFSFLFDMDVVEKKNVLVGDFMPSVKYTGDIRVCAYLDTAETQHARVKSFAMDILKRSSSIWASEVVASLDTMWDTIDAGVAKSNSASYIKPLQRFIFHFLTKCLVGADPAVSPEIAESGYVMLDKWVFLQLLPTISVNFLQPLEEIFLHSFAYPFFLVKGDYRKLYDFVEQHGQAVLQRGETEFNLSKEETIHNLLFVLGFNAFGGFTIFFPSLLSALSGKPELQAKLREEVRSKIKPGTNLTFESVKDLELVHSVVYETLRLNPPVPLQYARARKDFQLSSHDSVFEIKKGDLLCGFQKVAMTDPKIFDDPETFVPDRFTKEKGRELLNYLFWSNGPQTGSPSDRNKQCAAKDYVTMTAVLFVTHMFQRYDSVTASGSSITAVEKAN* 539
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 5970027 5975989 - Vvi12g412 Vvi12g412 772935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g412 538 Pfam Cytochrome P450 365 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g412 538 PRINTS E-class P450 group IV signature 400 416 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g412 538 PRINTS E-class P450 group IV signature 437 451 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g412 538 PRINTS E-class P450 group IV signature 453 471 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g412 538 PANTHER INACTIVE LINOLENATE HYDROPEROXIDE LYASE-RELATED 75 535 - -
Vvi12g412 538 Gene3D Cytochrome P450 79 537 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g412 538 PANTHER CYTOCHROME P450 26 75 535 - -
Vvi12g412 538 SUPERFAMILY Cytochrome P450 79 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g412 K10528 - vvi:100251750 936.406