Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g433 ATGGCTGACATAACTCACCTTCCCATGGAGCAGCTCCAGGACCTTGAGTACTGCATAGACTCTAACCCTCCTTGGCCCGAAACAATTCTATTAGCATTTCAAAACTATATTTTAGTGTTGGGCACGAGCGTTATGATCCCTTCTTTGCTAGTTCCAGTAATGGGTGGAAACGATGGGGACAAGATACGAGTTATACAAACTCTGCTCTTTGTAGCTGGCATTAACACACTTCTCCAAGCACTTTTTGGGACCAGGTTGCCCGCTGTAGTTGGAGGATCCTTTGCGTATATCATTCCCATAGTTTACATAATAAGCGATTCATCTCTACAACGAATTTCTGAACCTCATGAAAGATTTATACATACAATGCGAGCTATCCAAGGAGCTTTGATTGTTGCTGCAAGTATACAAATCATCTTGGGTTACAGCCAAGTTTGGGGTCTGTTTTCAAGGTTCTTTAGTCCTCTTGGGATGGCACCTGTGGTTGGATTGGTTGGTTTGGGATTGTTCCAACGAGGATTCCCTGCGTTGGGGAATTGTGTTGAAATTGGGATCCCGATGCTACTTTTGGTCATTGGAGTGTCACAATATCTAAAGCATGTGAGGCCATTAAGGGGCACACCCATTTTTGAACGATTTCCAGTATTGATCTGTGTTACAATTGTATGGATCTATGCCCTCATCTTGACTGCTAGTGGTGCCTACCGAGGCAGGCCTATACAAACTCAAATCAGTTGTCGTACGGACAAAGCAAACCTCATATCCTCTGCTCCATGGTTTAAGTTTCCATATCCCCTGCAATGGGGTCCACCTACTTTTGCAGCGGGTCATTCGTTTGCTATGATGTCTGCAGTTCTTGTATCGATGATTGAGTCAACTGGGGCATATAAGGCAGCATCGCGGTTGGCAATTGCAACTCCACCTCCCGCTTATGTACTGAGCCGGGGTATTGGCTGGCAGGGGATTGGGATTTTGCTGGATGGTCTTTTTGGAACCTGCACTGGTTCCACTGTATCTGTGGAAAATGTGGGACTTCTAGGACTGACTCGAGTTGGAAGTCGTAGAGTTGTTCAGATTTCTGCTGGCTTCATGATATTCTTCTCCATGTTAGGCAAATTTGGAGCAGTTTTTGCTTCTATACCGTTTCCTATTTTTGCTGCATTATATTGTGTTCTTTTCGGCCTTGTGGCATCAGTTGGGCTGTCATTTCTTCAGTTCACAAACATGAACTCCATGAGAAATCTTATCATTACGGGGCTCTCCCTCTTCCTTGGGATATCTGTTCCTCAATTTTTTAACGAATATTGGGGTCGTAATCGCCATGGTCTTGTCAATACCAATGCTGGATGGTTCAATGCATTCTTGAATACCATATTCTCATCACCAGCAACGATAGGATTGATCGTTGCAGTGTTTCTGGATAACACATTAGATGTGGAAAAGGCGAAGAAAGACAGAGGGATGCCATGGTGGGTAAAGTTCAGAACATTTAGAGGAGATAACCGAAACGAAGAGTTCTACACTCTGCCATTCAATCTCAACAGGTTCTTTCCACCAACATAG 1563 44.15 MADITHLPMEQLQDLEYCIDSNPPWPETILLAFQNYILVLGTSVMIPSLLVPVMGGNDGDKIRVIQTLLFVAGINTLLQALFGTRLPAVVGGSFAYIIPIVYIISDSSLQRISEPHERFIHTMRAIQGALIVAASIQIILGYSQVWGLFSRFFSPLGMAPVVGLVGLGLFQRGFPALGNCVEIGIPMLLLVIGVSQYLKHVRPLRGTPIFERFPVLICVTIVWIYALILTASGAYRGRPIQTQISCRTDKANLISSAPWFKFPYPLQWGPPTFAAGHSFAMMSAVLVSMIESTGAYKAASRLAIATPPPAYVLSRGIGWQGIGILLDGLFGTCTGSTVSVENVGLLGLTRVGSRRVVQISAGFMIFFSMLGKFGAVFASIPFPIFAALYCVLFGLVASVGLSFLQFTNMNSMRNLIITGLSLFLGISVPQFFNEYWGRNRHGLVNTNAGWFNAFLNTIFSSPATIGLIVAVFLDNTLDVEKAKKDRGMPWWVKFRTFRGDNRNEEFYTLPFNLNRFFPPT* 521
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 6203926 6213938 + Vvi12g433 Vvi12g433 772956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g433 520 Pfam Permease family 28 432 IPR006043 GO:0016020|GO:0022857|GO:0055085
Vvi12g433 520 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 3 520 - -
Vvi12g433 520 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER 2 3 520 IPR029948 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi10g10 Vvi12g433 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g433 - - vvi:100249876 1043.49