Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi12g502 | ATGACTCCTCTTAAGTCAGGGAATAAATCACTCAAAAAACCATATAGTTTCCTTGCCAAGGCCATGGACACTGGTACTACCTTCTACTTCGTCCCATACATCCTTTGTATCATTCCAAGTCTCCTCCTCCTCTCCTTCCTCAAAACCCTAGTAAAACCTCCCACTGCATCTCGACCTCCACCCAGCCCCCCGACGCTCCCCATCATCGGTCACGTCCATCTTCTCACCTCCATCCTTCCCAAATGCTTCCAAACCCTAGCCTCCCGTTACGGTCCCCTTATGCAGCTTCGTCTCGGTTCATCAACTTGTATCGTTGTATCCAACGCTGCCGTTGCTAAAGAAGTCATGAAAACCCATGAACTAGCCTTCGCCTCTCGCCCTGAATTCGGGTCCTCAGAACACTTCATCTACAAAGGATCCAGGTTCATCATGGCGGAGTACGGCCCATACTGGCGCTTCATGAAGAAACTGTGTCTGACAAAGCTTCTCGCGGCTCCCACCCTCGATCGACTAATCCATATCCGAGAGGAAGAGATGGGAAAGCTCATGGACACACTGATTCAGAGGTCGAGGAAAGGGGAAGCTTCAGATTTGAGCAAGGAGCTGACAACGTTGACAAGCAATATCATATGCAGGATGGCGATGAGCACAAGGTGCAGTAGAAACGGTAATGAAGCTGAGGAGATGATGGAGTTGGTGAAGGGGGTGGTGGAGCTTGGAGGGAAGCTGTCTATAGGAGATGCTTTGGGGGCTTTGGGGAGACTAGACTTATTGGGATATGGGAAAAAGCTTGAAGCAAAGCTGAGGAAATTTGACAACCCTTCTGCTGAATTGAAGTTGACCAGGACTGACATCAAGTCTTTCTTCCTTGACATATTACTGGCAGGAACTGACACTCAATCAGTGGCCACACAATGGGCCATGGCGGAGCTCATCAACCGTCCACGTGTCTTCAACAAGCTCAGAGAGGAAATTGATTCAATTGTGGGGTCCACTAGGCTGGTCAAAGAATCGGACGTCCCAAATCTCCCCTACCTCCAAGCGGTTGTCAAAGAAACCCTTAGACTCCACACATCAGCACCGTTCATCCTCAGACAGTGCATTCAAGATTGCAAGATTGACGGCTATGATATCAAGGCCAATACACGTGTCATGATTAGCGCCTTTGCCATCATGCAGGACCCGAACTCGTGGGAAGATCCAAGTGAGTTTATACCCGAGAGGTTCTTGGTCAACTCGGGTGAGAACATGGTTGACCATGTGACTGAAATCAAGGGCCAGGATTTTAGGTATGTCCCATTTGGGAGTGGAAGGAGAGGATGCCCTGGTGCTGCACTTGCAATGATGGTGATGCAGATGACAATCGGACGGTTGGTTCAATGCTTTGACTGGAGAGTCAAAGATGGGGAAAAGGTTGATTTGAATGTAGGCCCAGGATTTTCAGCTGAAATGAAAACCCCACTTGTGTGTTTTACAAGCATACACTTTGATCCCCTTGGCGAAGTATATGCAAGGCACGTGGAAGGGTGA | 1530 | 48.95 | MTPLKSGNKSLKKPYSFLAKAMDTGTTFYFVPYILCIIPSLLLLSFLKTLVKPPTASRPPPSPPTLPIIGHVHLLTSILPKCFQTLASRYGPLMQLRLGSSTCIVVSNAAVAKEVMKTHELAFASRPEFGSSEHFIYKGSRFIMAEYGPYWRFMKKLCLTKLLAAPTLDRLIHIREEEMGKLMDTLIQRSRKGEASDLSKELTTLTSNIICRMAMSTRCSRNGNEAEEMMELVKGVVELGGKLSIGDALGALGRLDLLGYGKKLEAKLRKFDNPSAELKLTRTDIKSFFLDILLAGTDTQSVATQWAMAELINRPRVFNKLREEIDSIVGSTRLVKESDVPNLPYLQAVVKETLRLHTSAPFILRQCIQDCKIDGYDIKANTRVMISAFAIMQDPNSWEDPSEFIPERFLVNSGENMVDHVTEIKGQDFRYVPFGSGRRGCPGAALAMMVMQMTIGRLVQCFDWRVKDGEKVDLNVGPGFSAEMKTPLVCFTSIHFDPLGEVYARHVEG* | 510 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 12 | 6864693 | 6866746 | + | Vvi12g502 | Vvi12g502 | 773025 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi12g502 | 509 | PANTHER | CYTOCHROME P450, FAMILY 712, SUBFAMILY A, POLYPEPTIDE 1 | 26 | 273 | - | - | |
| Vvi12g502 | 509 | PANTHER | CYTOCHROME P450, FAMILY 712, SUBFAMILY A, POLYPEPTIDE 1 | 273 | 500 | - | - | |
| Vvi12g502 | 509 | SUPERFAMILY | Cytochrome P450 | 57 | 490 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi12g502 | 509 | Gene3D | Cytochrome P450 | 54 | 491 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi12g502 | 509 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 273 | 500 | - | - | |
| Vvi12g502 | 509 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 26 | 273 | - | - | |
| Vvi12g502 | 509 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 434 | 443 | IPR017972 | GO:0005506|GO:0016705 | |
| Vvi12g502 | 509 | PRINTS | E-class P450 group I signature | 87 | 106 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi12g502 | 509 | PRINTS | E-class P450 group I signature | 111 | 132 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi12g502 | 509 | PRINTS | E-class P450 group I signature | 284 | 301 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi12g502 | 509 | PRINTS | E-class P450 group I signature | 304 | 330 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi12g502 | 509 | PRINTS | E-class P450 group I signature | 347 | 365 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi12g502 | 509 | PRINTS | E-class P450 group I signature | 387 | 411 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi12g502 | 509 | PRINTS | E-class P450 group I signature | 431 | 441 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi12g502 | 509 | PRINTS | E-class P450 group I signature | 441 | 464 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi12g502 | 509 | Pfam | Cytochrome P450 | 276 | 489 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi12g502 | 509 | Pfam | Cytochrome P450 | 60 | 239 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi12g502 | 509 | PRINTS | P450 superfamily signature | 295 | 312 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi12g502 | 509 | PRINTS | P450 superfamily signature | 348 | 359 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi12g502 | 509 | PRINTS | P450 superfamily signature | 432 | 441 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi12g502 | 509 | PRINTS | P450 superfamily signature | 441 | 452 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi12g502 | - | - | vvi:100263622 | 903.279 |