Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi12g526 | ATGTCTGAACTCGACGCAAATATTCCAACCACTTTTGACCCTTTTGCTGATGCAAATGCTGAGGACTCGGGCGCGGGGACAAAAGAGTACGTCCATGTGCGTATCCAGCAGCGTAATGGGAGGAAAAGCCTGACTACCGTGCAAGGGTTGAAGAAGGAATTCAGCTACAACAAGATTCTCAAGGACCTCAAGAAGGAGTTCTGCTGCAATGGCACTGTTGTCCAGGACCCTGAGCTAGGCCAGGTCATTCAACTTCAGGGTGATCAAAGGAAGAATGTTTCCACATTCCTTGTGCAGGCTGGCATTGTGAAGAAGGAAAACATCAAGATCCATGGTTTTTGA | 342 | 47.95 | MSELDANIPTTFDPFADANAEDSGAGTKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHGF* | 114 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 7162997 | 7166130 | - | Vvi12g526 | Vvi12g526 | 773049 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi12g526 | 113 | Gene3D | - | 2 | 113 | - | - | |
Vvi12g526 | 113 | TIGRFAM | SUI1_MOF2: translation initiation factor SUI1 | 8 | 113 | IPR005874 | GO:0003743 | |
Vvi12g526 | 113 | PIRSF | Transl_init_SUI1_Euk | 1 | 113 | IPR005874 | GO:0003743 | |
Vvi12g526 | 113 | ProSiteProfiles | Translation initiation factor SUI1 family profile. | 31 | 101 | IPR001950 | GO:0003743|GO:0006413 | |
Vvi12g526 | 113 | SUPERFAMILY | eIF1-like | 6 | 113 | IPR036877 | GO:0003743|GO:0006413 | |
Vvi12g526 | 113 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 | 1 | 113 | - | - | |
Vvi12g526 | 113 | CDD | eIF1_SUI1 | 29 | 112 | IPR005874 | GO:0003743 | |
Vvi12g526 | 113 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Vvi12g526 | 113 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 | 1 | 113 | - | - | |
Vvi12g526 | 113 | Pfam | Translation initiation factor SUI1 | 28 | 102 | IPR001950 | GO:0003743|GO:0006413 |
Event-related genes

Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi12g526 | K03113 | - | vvi:100243115 | 229.18 |