Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g530 ATGTCTTCTCAAAAGCTCTTCTCAGCTTTCTTTCTCCAAGTGATCCTTGCCACTTTGGTCTTAGGCGTGGCAAATGTGCAGTGCTTGAAACTTGGTTTCTACAAGAAAACATGTCCTGCAGCTGAGGATATCGTGCGAAAGACTACGGCCCAATACATTTCAAAAGCACCAACTCTTGCAGCTCCTTTGCTGAGAATGCATTTTCATGACTGTTTTGTTAGGGGATGCGATGGTTCGGTTCTATTGAATTCAACAAAGAATAACCAAGCTGAAAAGGATGCAATCCCCAACCTAAGCCTCAGAGGTTACCATGTTATCGATGCAGCAAAATCTGCAGTGGAAAAGAAGTGTCCAGGAGTGGTTTCTTGTGCTGACATCCTAGCCCTTGTAGCTAGAGATGCAGTTTCAATGATCAATGGACCGTATTGGAAAGTCCCTACAGGTAGAAGGGATGGAAAAGTATCAGTTGCCTTGGAGGCCTTAATAAATTTGCCACCTCCTTTCGCCAACATTACTCAACTAAAATCAATGTTCCACTCAAAGGGTCTGTCTGTAAAAGACCTAGTAGTTCTATCAGGTGGACACACAATTGGGATCTCTCACTGTTCATCCTTCACCAACCGCCTATACAACTTCACTGGAAAAGGTGACACTGACCCCTCCATGGATCCCAACTATGTGATTCAGTTGAAGAAGAAATGCAGGCCGGGAGACGTTACTACAATAGTAGAGATGGACCCTGGAAGCTTCAAAACATTCGATGGAGACTATTACACTATGGTGGCTAAGAGAAGAGGCCTTTTCCAATCTGATGTAGCTCTTCTTGATGATGTTCAGACTAGAAAATATGTAAAACTTCACTCATTTTCCCATGGAAAGAGTTTTGGGAAAGATTTTGCAGCATCCATGGTCAAAATGGGAAAGGTTGGAGTGCTGACAGGCAAGGCGGGTGGAATCAGGAAATACTGTGGAGCTAGAAATAGGATTCAAAAGGCAATAAGAAAGAGACTAGTTTTACAGAGGCAAATGCGAGCAAAAAGTAACATTTTGCTTATTAATTGGTTTGTTAATTTCTCTTTAAAACTAAAGTCATTAGACCAAAACCTCCCCCTCTAA 1116 42.29 MSSQKLFSAFFLQVILATLVLGVANVQCLKLGFYKKTCPAAEDIVRKTTAQYISKAPTLAAPLLRMHFHDCFVRGCDGSVLLNSTKNNQAEKDAIPNLSLRGYHVIDAAKSAVEKKCPGVVSCADILALVARDAVSMINGPYWKVPTGRRDGKVSVALEALINLPPPFANITQLKSMFHSKGLSVKDLVVLSGGHTIGISHCSSFTNRLYNFTGKGDTDPSMDPNYVIQLKKKCRPGDVTTIVEMDPGSFKTFDGDYYTMVAKRRGLFQSDVALLDDVQTRKYVKLHSFSHGKSFGKDFAASMVKMGKVGVLTGKAGGIRKYCGARNRIQKAIRKRLVLQRQMRAKSNILLINWFVNFSLKLKSLDQNLPL* 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 7187047 7189996 + Vvi12g530 Vvi12g530 773053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g530 371 Gene3D - 32 327 - -
Vvi12g530 371 SUPERFAMILY Heme-dependent peroxidases 29 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi12g530 371 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g530 371 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g530 371 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g530 371 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g530 371 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g530 371 Pfam Peroxidase 45 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g530 371 ProSiteProfiles Plant heme peroxidase family profile. 28 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g530 371 PANTHER PEROXIDASE 11 324 - -
Vvi12g530 371 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Vvi12g530 371 Gene3D Peroxidase, domain 2 165 306 - -
Vvi12g530 371 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Vvi12g530 371 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g530 371 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g530 371 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g530 371 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g530 371 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g530 371 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g530 371 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g530 371 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g530 371 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g530 371 CDD secretory_peroxidase 29 325 IPR033905 GO:0004601|GO:0042744
Vvi12g530 371 PANTHER PEROXIDASE 25-RELATED 11 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi10g10 Vvi12g530 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g530 K00430 - vvi:100260174 652.129