Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g531 ATGTCTACTCAGAAGCTTTTCTCAGCTTTGTTTCTTCAACTAATCCTTGCCATTTTCGTCCTAGACGTTGCCGATGCGCAGTACTTGAAGCTCGGGTTCTACAAGAACACATGCCCAGCAGCTGAGGACATTGTCCGAGAGACTACAGCTCAATACATTTCAAAAGCACCAACTCTTGCAGCTTCCTTGCTGAGAATACATTTTCATGACTGTTTTGTCAGGGGTTGCGATGGATCAGTCTTATTGAACTCTACAAAGCATAATCAAGCTGAAAAGGATGCAATCCCCAACCTAAGCCTCAGAGGCTACCAAGTTATTGATGCAGCAAAATCTGCAGTGGAAAAGAAGTGTCCAGGAGTGGTTTCTTGTGCTGACATCCTAGCCCTAGTAGCTCGAGATGCAGTTTCAATGATCAATGGACCATATTGGCAAGTCCCCACTGGAAGAAGGGATGGAAAATTATCAGTTGCCTTGGAGGCCTTAACAAATTTGCCTCCTCCTTTCGCCAACATTACTCAACTAAAAGCAATGTTCCAGTCAAAGGGTCTGTCTATAAAAGACCTAGCAGTTCTATCAGGTGGACACACAATTGGGATCTCTCACTGTTCATCCTTCACCAACCGCCTTTACAACTTCACTGGGAAAGGTGACACTGACCCTTCCATGGATCCCAACTATGTGATCCAATTGAAGAAGAAATGCAAGCCAGGAGATGTTTCTACAGTTGTGGAGATGGACCCCGGAAGCTTCAAATCATTTGATGAAGACTACTACTCTGTTGTAGCTAAAAGGAGGGGCCTTTTCCAATCCGATGCAGCTCTTCTTGATGATGTTGAGACTAGCAAATATGTGAGACTTCAGTCTTTTTCCCATGGAAAATCTTTTGGGCGAGACTTTGCAGCATCCATGGTCAAAATGGGCAGGATTGGAGTGCTCACTGGGAATGCAGGTGAAATCAGGAAATACTGTGCCTTTCCTATAAATCTTGCTACAACTGTGACAACAGACAGAAGAAACGTAAACATGGAGAGGATTAGCCTTTTGGGGATTGTAATCTTGGGTTTTGCTGGGATTTTGGGTTCAGTTCAAGCTGATTTGAAGCTGGGTTTTTATGGTGAGAGCTGCCCTAAAGCTGAGAAAATTGTGTTGGACTATGTCAAGAAGCATATCCCAAATGCCCCATCTTTGGCAGCAGCCCTTATCAGAATGCACTTCCATGATTGTTTTGTGAGGGGTTGTGATGGATCAGTTCTGATAAACTCCACCTCAAGCAACCAAGCTGAGAAGGATGGTACTCCAAATCTAACCCTAAGAGGCTTTGACTTCATTGAAAGAGTGAAGAGTGTGGTTGAAGCTGAATGCCCCGGCATAGTCTCCTGTGCAGACATCCTTGCTTTAGTGGCCAGAGACTCCATTGTTGTCACTGGTGGTCCATTCTGGAACGTCCCAACTGGTAGAAGGGACGGACTGATATCAAATTCATCAGAGGCAGTATCCGATATCCCGCGGCCAGTTAACAACTTCACTACTCTCCAGACATTGTTTGCCAATAAGGGTCTTGACTTAAACGATCTAGTTTTACTGTCCGGTGCTCATACTATTGGGGTTTCTCACTGTTCATCGTTCTCCAACCGACTGTATAATTTTACTGGGGTTGGCGATGAGGACCCGGCTTTGGACAGCGAATATGCAGCAAATCTCAAGGCAAGAAAGTGTAAAGTAGCTACTGATAATACCACAATAGCTTTTATCACTCAAATCCTTCAAGGGCCCCTGTCGAGTTTCTTGGCTGAATTTGCAAAATCAATGGAGAAGATGGGTCGGATCGAGGTGAAGACTGGAACAGCAGGCGAGGTCAGGAAGCAGTGTGCATCCTGCCTAATCCCCATCAGAATCGCCATCTTCTTCGCCGCTCACAGCCTCTCCCGTGACGCCTCCGAGTGCCACTCCGGCTTTGAGTCCGACTACGCAAGCGTCTTCCCCGATTCCATCTCCCGAATCCACCACTCTACCTAG 2016 46.03 MSTQKLFSALFLQLILAIFVLDVADAQYLKLGFYKNTCPAAEDIVRETTAQYISKAPTLAASLLRIHFHDCFVRGCDGSVLLNSTKHNQAEKDAIPNLSLRGYQVIDAAKSAVEKKCPGVVSCADILALVARDAVSMINGPYWQVPTGRRDGKLSVALEALTNLPPPFANITQLKAMFQSKGLSIKDLAVLSGGHTIGISHCSSFTNRLYNFTGKGDTDPSMDPNYVIQLKKKCKPGDVSTVVEMDPGSFKSFDEDYYSVVAKRRGLFQSDAALLDDVETSKYVRLQSFSHGKSFGRDFAASMVKMGRIGVLTGNAGEIRKYCAFPINLATTVTTDRRNVNMERISLLGIVILGFAGILGSVQADLKLGFYGESCPKAEKIVLDYVKKHIPNAPSLAAALIRMHFHDCFVRGCDGSVLINSTSSNQAEKDGTPNLTLRGFDFIERVKSVVEAECPGIVSCADILALVARDSIVVTGGPFWNVPTGRRDGLISNSSEAVSDIPRPVNNFTTLQTLFANKGLDLNDLVLLSGAHTIGVSHCSSFSNRLYNFTGVGDEDPALDSEYAANLKARKCKVATDNTTIAFITQILQGPLSSFLAEFAKSMEKMGRIEVKTGTAGEVRKQCASCLIPIRIAIFFAAHSLSRDASECHSGFESDYASVFPDSISRIHHST* 672
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 7190474 7200729 + Vvi12g531 Vvi12g531 773054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g531 671 ProSitePatterns Peroxidases active site signature. 397 408 IPR019794 GO:0004601
Vvi12g531 671 Gene3D - 32 324 - -
Vvi12g531 671 PANTHER PEROXIDASE 575 625 - -
Vvi12g531 671 PANTHER PEROXIDASE 26 324 - -
Vvi12g531 671 PANTHER PEROXIDASE 345 581 - -
Vvi12g531 671 CDD secretory_peroxidase 366 623 IPR033905 GO:0004601|GO:0042744
Vvi12g531 671 SUPERFAMILY Heme-dependent peroxidases 366 624 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi12g531 671 ProSitePatterns Peroxidases proximal heme-ligand signature. 524 534 IPR019793 -
Vvi12g531 671 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g531 671 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g531 671 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g531 671 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g531 671 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g531 671 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g531 671 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g531 671 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g531 671 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g531 671 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Vvi12g531 671 Gene3D Peroxidase, domain 2 165 306 - -
Vvi12g531 671 SUPERFAMILY Heme-dependent peroxidases 29 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi12g531 671 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Vvi12g531 671 CDD secretory_peroxidase 29 325 IPR033905 GO:0004601|GO:0042744
Vvi12g531 671 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g531 671 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g531 671 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g531 671 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g531 671 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g531 671 Pfam Peroxidase 45 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g531 671 Pfam Peroxidase 386 580 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g531 671 ProSiteProfiles Plant heme peroxidase family profile. 28 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g531 671 PANTHER PEROXIDASE 25-RELATED 575 625 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g531 671 PANTHER PEROXIDASE 25-RELATED 345 581 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g531 671 PANTHER PEROXIDASE 25-RELATED 26 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g531 671 ProSiteProfiles Plant heme peroxidase family profile. 365 627 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g531 671 Gene3D - 366 517 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g531 - K00430 egu:105052151 794.653