Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g600 ATGGAGTTTGATCTGGAGAACCCATTAACATCGTCCCAAGACCTCCACTCTCATGCAGTTGCTTCGCTTTTTCAAGCTGAAAATCATCACATGCCCTCCATTGACTACTGCGGAAGTCTAGACTCTGTAGATTGTGATGTTTCGTTTAGAAGACAGGCCATCTCTTCCATTTTGCAGATGTCTAGCAGCTTTGATCCGTTTCTCTCGTATCTCGCCATTAATTACCTCGATCGGTTCTTGTCCAGGAGCGAAATGCCGAGTGAAAAGCCATGGATCCTTAGGCTTCTTGCTGTCTCTTGCGTTTCTCTGGCTGCAAAGATGAAGAAAACAGAGTTTTCCCTCGCAGATTTCCAGGGCGAAGGAGGCTTCATCTTCGATTCAGAGACGATAATGCGGATGGAGATTCTTGTTCTCGGAGCCTTGAAATGGCGAATGCGCTCAGTCACTCCCTTCTCCTTCATCTCCTTCTTCATCTCCTTATTCAAACTCAAAGACCCGCCATTGCTGGAAGCTCTCAAAGCTCGAGTCATAGAGATCATCCTCAAATCCCAAAAGGAAATCAAGCTTTTGCAGTTCAAGCCATCCATCATCGCCGCATCGACCCTCCTCTACGCCTGCCACGAGCTCTTCCCACTCCAATTCCCGTGCTTCATGACCGCAATTTCCAATTGTCCATATGTAAATAAAGAAAAGATGCTGTGTTGCTACAGTGCAGTGAGGGAAATGGAGATAAAGGAGTTCGACAGCTTATACGGCGTGGTTTCGAGCTCGAGCTCGCCGGTGAATGTGCTGGACCGGCACTGCCTGAGCTCGGAGAGTGAGAAGAGCCACACAATGGGAGCAGAGAGCGACGTGAAGAGACGCAAAATCAGTTGGGGGAATAATAGTTTTGATAATAAAATAATTTCCTTTTTGCAAAATGATTTTTCCAAATATATATATATTTAG 948 46.1 MEFDLENPLTSSQDLHSHAVASLFQAENHHMPSIDYCGSLDSVDCDVSFRRQAISSILQMSSSFDPFLSYLAINYLDRFLSRSEMPSEKPWILRLLAVSCVSLAAKMKKTEFSLADFQGEGGFIFDSETIMRMEILVLGALKWRMRSVTPFSFISFFISLFKLKDPPLLEALKARVIEIILKSQKEIKLLQFKPSIIAASTLLYACHELFPLQFPCFMTAISNCPYVNKEKMLCCYSAVREMEIKEFDSLYGVVSSSSSPVNVLDRHCLSSESEKSHTMGAESDVKRRKISWGNNSFDNKIISFLQNDFSKYIYI* 316
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 8133180 8135185 - Vvi12g600 Vvi12g600 773123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g600 315 Gene3D - 33 146 - -
Vvi12g600 315 SUPERFAMILY Cyclin-like 14 145 IPR036915 -
Vvi12g600 315 SMART Cyclin_C_2 148 273 IPR004367 -
Vvi12g600 315 SMART cyclin_7 55 139 IPR013763 -
Vvi12g600 315 CDD CYCLIN 50 138 IPR013763 -
Vvi12g600 315 Pfam Cyclin, N-terminal domain 22 145 IPR006671 -
Vvi12g600 315 Gene3D - 22 237 - -
Vvi12g600 315 Pfam Cyclin, C-terminal domain 148 242 IPR004367 -
Vvi12g600 315 SUPERFAMILY Cyclin-like 129 206 IPR036915 -
Vvi12g600 315 PANTHER CYCLINS 5 277 IPR039361 -
Vvi12g600 315 PANTHER CYCLIN-D6-1-RELATED 5 277 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g600 K18812 - vvi:100251144 565.074