Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g71 ATGGTGGTGAAGGTGTATGGCCCAGATTTTGCTTCTGCAAAGCGCGTGCTTGTTTGCCTCATTGAGAAGGAGGTCGAATTCGAGACTCTCCCCATTGATATCATCAAAGGACAGAATAAGGATCCAGAATTCCTGAAGTTGCAGCCTTTTGGAGTTGTTCCTGTCATTCAAGATGGAGACTATACCTTATTTGAATCTCGTGCAATCATGAGGTACTATGCTGAGAAGTACAAGTCTCAAGGAACTGATTTACTGGGGAAGACAATAGAGGAGAGGGGAGTGGTGGAACAATGGCTGGAGGTTGAAGCACAAAGTTACCACCCAGCAATTGACAATTTAGTCATTGAAATTCTGTTTGGCCGCAAACGGGGTATTCCCCCAGATGCGAAAGTGATCGAAGAGAGTGAAAAGAAGCTTGCAAAGGTGTTGGACATCTATGAAGAGAGGCTGTCCAAGAGCAAGTACCTGGCTGGGGATTTCTTTAGCCTTGCTGATCTTAGCCACCTTCCATTCACAAAGTACTTGGCTGATATGGGGAAGATGTATTTGATTGAGGAGAGGAAACACGTGAAGGCATGGTGGGATGATATCAGTAATAGACCATCCTGGAAGAAGGTCTTCAGCTCTAGATGGCCCCTCTTGGAGTGA 648 45.68 MVVKVYGPDFASAKRVLVCLIEKEVEFETLPIDIIKGQNKDPEFLKLQPFGVVPVIQDGDYTLFESRAIMRYYAEKYKSQGTDLLGKTIEERGVVEQWLEVEAQSYHPAIDNLVIEILFGRKRGIPPDAKVIEESEKKLAKVLDIYEERLSKSKYLAGDFFSLADLSHLPFTKYLADMGKMYLIEERKHVKAWWDDISNRPSWKKVFSSRWPLLE* 216
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 1434238 1435842 - Vvi12g71 Vvi12g71 772594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g71 215 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 215 IPR010987 -
Vvi12g71 215 CDD GST_N_Phi 2 76 - -
Vvi12g71 215 Gene3D Glutaredoxin 1 85 - -
Vvi12g71 215 SUPERFAMILY Thioredoxin-like 3 81 IPR036249 -
Vvi12g71 215 SUPERFAMILY GST C-terminal domain-like 72 212 IPR036282 -
Vvi12g71 215 CDD GST_C_Phi 90 206 IPR034347 -
Vvi12g71 215 Pfam Glutathione S-transferase, C-terminal domain 126 201 IPR004046 -
Vvi12g71 215 Pfam Glutathione S-transferase, N-terminal domain 3 74 IPR004045 -
Vvi12g71 215 PANTHER GLUTATHIONE S-TRANSFERASE 2 207 - -
Vvi12g71 215 Gene3D - 86 207 - -
Vvi12g71 215 SFLD Glutathione Transferase (cytosolic) 5 200 IPR040079 -
Vvi12g71 215 SFLD Main (cytGST) 5 200 - -
Vvi12g71 215 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 81 IPR004045 -
Vvi12g71 215 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 207 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g71 K00799 - vvi:100233042 435.647