Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi12g72 | ATGGTGGTGAAGGTGTATGGCCCAGCCTTTGCTTGTCCAAAGCGTGTCCTTATTTGCCTTGTTGAGAAGGAGATTGAGTTTGAGACTGTCCCAGTTGATATCATCAAAGGAGAGCACAAGGATCCTGAATACCTCAAGTTACAGCCTTTTGGAGTGGTTCCTGTCATTCAAGATGGAGATTATACTTTATATGAATCAAGAGCTATCATAAGGTACTATGCAGAGAAGTACAAGTCTCAAGGAACTGATTTGCTTGGGAAGACAATAGAGGAAAGGGGTACTGTGGAGCAGTGGCTAGAGGTTGAAGCACAAAACTACCACCCACCAATATACAATTTAGTTCTTCACGTTCTGTTCAGTGACAAGATGGGGTTTCCTGCAGATGCAAAAGTGATTGAAGAGAGTGAGAAAAATCTTGGGAAAGTGTTGGACATTTACGAGGAGAGGCTGTCTAAGAGCAAGTACTTGGCTGGGGACTTCTTTAGCCTTGCTGATCTCAGCCACATTCCTTTCACTAACTACTTGGGTGCTATGGGCAAGATGTATTTGATTAAGGAGAGAGAGCATGTGAGTGCATGGTGGGATGATATTAGTAGCAGGCCATCTTGGAAAAAGGTCCTTGAGCTCTACCCTGCCCCAATCTTGGAATAA | 651 | 43.93 | MVVKVYGPAFACPKRVLICLVEKEIEFETVPVDIIKGEHKDPEYLKLQPFGVVPVIQDGDYTLYESRAIIRYYAEKYKSQGTDLLGKTIEERGTVEQWLEVEAQNYHPPIYNLVLHVLFSDKMGFPADAKVIEESEKNLGKVLDIYEERLSKSKYLAGDFFSLADLSHIPFTNYLGAMGKMYLIKEREHVSAWWDDISSRPSWKKVLELYPAPILE* | 217 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 12 | 1438516 | 1440021 | - | Vvi12g72 | Vvi12g72 | 772595 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi12g72 | 216 | CDD | GST_N_Phi | 2 | 76 | - | - | |
| Vvi12g72 | 216 | Pfam | Glutathione S-transferase, N-terminal domain | 2 | 74 | IPR004045 | - | |
| Vvi12g72 | 216 | SFLD | Main (cytGST) | 4 | 200 | - | - | |
| Vvi12g72 | 216 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 1 | 81 | IPR004045 | - | |
| Vvi12g72 | 216 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 88 | 214 | IPR010987 | - | |
| Vvi12g72 | 216 | PANTHER | GLUTATHIONE S-TRANSFERASE | 2 | 213 | - | - | |
| Vvi12g72 | 216 | Gene3D | - | 86 | 207 | - | - | |
| Vvi12g72 | 216 | SUPERFAMILY | GST C-terminal domain-like | 83 | 206 | IPR036282 | - | |
| Vvi12g72 | 216 | SFLD | Glutathione Transferase (cytosolic) | 4 | 200 | IPR040079 | - | |
| Vvi12g72 | 216 | SUPERFAMILY | Thioredoxin-like | 2 | 81 | IPR036249 | - | |
| Vvi12g72 | 216 | Pfam | Glutathione S-transferase, C-terminal domain | 122 | 201 | IPR004046 | - | |
| Vvi12g72 | 216 | Gene3D | Glutaredoxin | 1 | 85 | - | - | |
| Vvi12g72 | 216 | PANTHER | GLUTATHIONE S-TRANSFERASE RHO | 2 | 213 | - | - | |
| Vvi12g72 | 216 | CDD | GST_C_Phi | 90 | 207 | IPR034347 | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi12g72 | K00799 | - | vvi:100233043 | 442.965 |