Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g747 ATGAGGCTCTCAGGTCCAGCCCTTTGCCTCCTGTCATTTCTTCTTATCTCTCTATTGCTTAGTCCCACCTTTGCTATTGAAAGGTCATACATAGTGTATTTGGGAGCACACTCACATGGCCCAGAACCCTCTTCTGATGATCTGGATCAAGTTACTGAGTCTCATTATGAGTTTCTTGGATCATTCCTGGGAAGTCGTGATAATGCCAAAGAAGCCATTATTTACTCATACACAAGACACATCAATGGCTTTGCTGCAACTCTCCAGGACCATGAAGCTGCCCAGATAGCCAACCATCCCAAAGTAGTCTCAGTTTTCTTGAACAAGGGAAGGAAACTACACACAACAAGATCATGGCACTTTCTGGGTCTGGAGAATGATGGCATAATTCCTTCCAATTCTATCTGGAAGAAGGCGAGATTCGGCCAAGATACCATCATAGGAAACCTCGACACCGGTGTCTGGCCTGAATCAGCGAGTTTTAGTGATGAAGGAATGGGACCAATTCCATCAAGATGGAGAGGAATCTGCCAAAATGACAAAGATGCTGGATTTCACTGCAATAGGAAGCTGATTGGGGCAAGATACTTCCACCAAGGATATGCTGCCGCCGTAGGCTCACTCAACTCTTCCTTCCATACCCCACGCGACACTGAGGGTCATGGGTCTCACACCTTATCAACAGCAGGTGGTAACTTTGTAGAGGGGGCTAGTGTTTTTGGCTTTGGCAATGGAACAGCGAAAGGTGGGTCGCCTAAAGCACGGGTGGCAGCTTACAAGGTGTGTTGGCCACCGGTGGGTGGCAATGAGTGCTTTGATGCAGATATACTGGCAGCGTTTGATATAGCCATCCATGATGGAGTTGATGTGCTATCTGCTTCACTAGGAGGATTACCCACACCCTTTTTCAACGATAGTCTTTCTATAGGTTCCTTCCATGCAGTTAAGCATGGTATTGTGGTGGTTTGCTCAGCTGGCAATTCTGGACCCGCTGATGGTACTGTTTCAAACATTTCACCATGGCAGTTCACCGTTGGAGCCAGCACCATGGATCGCCAGTTCCCTAGTTATCTTGTCCTTGGAAACAAGAAACGCTTAGAGGGAGGAAGTCTTTCACCTAAAGCCTTGCCACCCAACAAGTTCTTTCCACTTATCAGTGCTGCAGATGCCAAAGCAGCTAATGCATCAGCTGATGACGCTTTGCTTTGTAAGGCTGGGACACTTGATCATAGCAAGGTGAAGGGAAAGATCTTGGTGTGCCTTCGAGGGGAGAATGCAAGGGTGGACAAGGGCCAGCAAGCTGCTCTGGCTGGTGCTGTGGGGATGGTTCTTGCCAACAATGAGCTTACTGGGAATGAAGTTATAGCTGATCCCCATGTCCTCCCTGCTTCGCATATCAACTTCACTGATGGGGTTGCTGTCTTCACCTACCTCAATTCGACTAAGTCTCCCATTGCTTATATTACACCTTCAACAACTGAGTTGGGCACTAAGCCAGCACCCTTCATGGCAGCTTTTTCATCAAAGGGACCTAACACCATTACACCAGAGATCCTTAAGCCAGATATAACCGCACCTGGAGTAAGTGTAATAGCTGCATACACTGAAGCACAAGGGCCAACTAATCAAGATTTTGATAAACGGAGAGTTCTATTTAACTCGGTATCAGGCACTTCAATGTCGTGCCCTCATGTTTCTGGCATTGTTGGCCTTCTTAAAACCCTCCACCCGGATTGGAGTCCTGCTGCTATTAGATCAGCAATGATGACCACCGCAAGAACAATGGACAATTCTATGGAAGCAATACTCAATGCATCCTATTTCAAGGCAACACCATTCAGCTATGGAGCAGGACATGTTCGGCCAAACCGTGCTATGAATCCAGGGTTGGTTTATGACTTAAATGTTAATGACTACCTCAACTTTCTATGTGCCTTGGGGTATAACCAAACCCTGATCAAAATGTTCTCAGAGAGGCCCTATACATGCCCCAAGCCAATCAGTCTCACCAACTTCAATTACCCTTCAATCACAGTCCCTAAGCTCCATGGCTCTATCACTGTGACTCGAACTCTTAAGAATGTTGGTCCTCCCGGAACCTACAAAGCACGCATCCGGAAACCCACTGGAATCTCAGTTTCAGTCAAGCCAGACAGCTTAAAATTCAATAAGATCGGGGAAGAGAAGACCTTCAGTCTTACTCTCCAGGCTGAAAGAGCCGGTGCAGCAAGGGACTATGTATTTGGAGAGTTGATATGGTCAGATGCTAAGCATTTTGTGAGAAGTCCTATTGTGGTGAAGGCAGCCTAG 2310 46.93 MRLSGPALCLLSFLLISLLLSPTFAIERSYIVYLGAHSHGPEPSSDDLDQVTESHYEFLGSFLGSRDNAKEAIIYSYTRHINGFAATLQDHEAAQIANHPKVVSVFLNKGRKLHTTRSWHFLGLENDGIIPSNSIWKKARFGQDTIIGNLDTGVWPESASFSDEGMGPIPSRWRGICQNDKDAGFHCNRKLIGARYFHQGYAAAVGSLNSSFHTPRDTEGHGSHTLSTAGGNFVEGASVFGFGNGTAKGGSPKARVAAYKVCWPPVGGNECFDADILAAFDIAIHDGVDVLSASLGGLPTPFFNDSLSIGSFHAVKHGIVVVCSAGNSGPADGTVSNISPWQFTVGASTMDRQFPSYLVLGNKKRLEGGSLSPKALPPNKFFPLISAADAKAANASADDALLCKAGTLDHSKVKGKILVCLRGENARVDKGQQAALAGAVGMVLANNELTGNEVIADPHVLPASHINFTDGVAVFTYLNSTKSPIAYITPSTTELGTKPAPFMAAFSSKGPNTITPEILKPDITAPGVSVIAAYTEAQGPTNQDFDKRRVLFNSVSGTSMSCPHVSGIVGLLKTLHPDWSPAAIRSAMMTTARTMDNSMEAILNASYFKATPFSYGAGHVRPNRAMNPGLVYDLNVNDYLNFLCALGYNQTLIKMFSERPYTCPKPISLTNFNYPSITVPKLHGSITVTRTLKNVGPPGTYKARIRKPTGISVSVKPDSLKFNKIGEEKTFSLTLQAERAGAARDYVFGELIWSDAKHFVRSPIVVKAA* 770
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 10151319 10162488 + Vvi12g747 Vvi12g747 773270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g747 769 Gene3D Peptidase S8/S53 domain 144 639 IPR036852 GO:0004252|GO:0006508
Vvi12g747 769 ProSitePatterns Serine proteases, subtilase family, serine active site. 557 567 IPR023828 -
Vvi12g747 769 Gene3D - 351 495 - -
Vvi12g747 769 Gene3D - 643 769 - -
Vvi12g747 769 SUPERFAMILY Subtilisin-like 113 630 IPR036852 GO:0004252|GO:0006508
Vvi12g747 769 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 114 IPR037045 -
Vvi12g747 769 CDD PA_subtilisin_like 357 488 - -
Vvi12g747 769 Pfam Peptidase inhibitor I9 29 114 IPR010259 -
Vvi12g747 769 PANTHER PEPTIDASE S8 14 768 - -
Vvi12g747 769 ProSiteProfiles Serine proteases, subtilase domain profile. 118 626 - -
Vvi12g747 769 CDD Peptidases_S8_3 112 592 IPR034197 -
Vvi12g747 769 Pfam Subtilase family 142 600 IPR000209 GO:0006508|GO:0008236
Vvi12g747 769 Pfam Fibronectin type-III domain 671 766 IPR041469 -
Vvi12g747 769 SUPERFAMILY PA domain 410 482 IPR046450 -
Vvi12g747 769 Pfam PA domain 396 472 IPR003137 -
Vvi12g747 769 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Vvi12g747 769 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
Vvi12g747 769 PRINTS Subtilisin serine protease family (S8) signature 556 572 IPR015500 -
Vvi12g747 769 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 14 768 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi12g747 Vvi19g753 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g747 - - vvi:100252770 1516.13