Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g748 ATGGCTGTAGGTTTTTGGTTTGTTCTTTTAGTTGGTCTGGTTGGGCTTGTCTTGGGTCTCATCTTGAACCACTTTCTGCCCTTGTTCTTCAAGCTTGGGCATGTCCCTAAAGGGACTTTTGGGTGGCCTCTACTGGGTGAAACCCTTTGTTTTTTGAAGCCTCACCCTTCTAATTCTCTTGGTGCATTTCTTCAAGACCGTTGTTCTAGGTTTGGCAAAGTGTTCAAATCCCACTTGTTCTTCTCTCCAACTGTGGTATCTTGTGACCAGGAGCTCAACTACTTCATACTTCAGAATGAAGACAAGTTGTTCCAGTGCAGTTATCCAAAGCCCATCCATGGTATTCTCGGGAAGATTTCCATGCTGGTGGCGGTAGGCGACACCCACAAGAGGCTCAGAAACGTGGCTCTCTCACTGGTCACCACTACAAAAACAAAGCCTGAGTTTCTCAACGAGGTGGAGAGGGCGGCCATTCGGGTTCTTGATTCCTGGAAAGATAAACCACAAATCATCTTCTGTGAAGAGGCTAGAAAGTTCACATTCAATGTAATAGTAAAGCAGGTCTTAGGCTTGACACCAGATGATCCACAGACTGCTAAAATTCTTCAAGATTTCCTCACTTTTATGAGAGGACTCATATCTCTCCCACTCTATATTCCCGGAACTCCATACGCAAGAGCTGTTCAGGCTAGAATTAGGATATCTTCTACTGTCAAAGCAATTATAGAGGAAAGAAGAAGAGATGCTGAGAATTCTAGCAAAAGGGATGATTTCCTTGAGATCCTTTTATGTGTTGATACCTTATCAGAAGATGAAAAAGTGAGCTTCGTTTTGGATTCTCTACTGGGTGGCTATGAAACTACCTCTCTCTTAATGGCCTTGGCTGTGCATTTTCTGGGTAAATCACCCACTGCACTGGAACAGTTAAAGCTGGAGCATCAGAAGATAAGAAGCATGAAGCAGAAAGATGACTATTTGAACTGGGATGATTATAAGCGAATGGATTTTACTCAAAATGTCATTCATGAAGCTCTCAGATGTGGCAATGTCGTGAAGTTTGTGCACAGAAAGGCTCTCAAAGATGTCAAATTTAGAGATTATCTAATTCCATCTGGTTGGAAGGTCCTACCAGTTTTCAGTGCAGTTCATTTGGACCCATCTCTCCATGCAAGTGCTCTCCAGTTCCATCCATGGAGATGGGAGGGCCGAGATCAAACATGCAAGAAATTTACTCCCTTTGGTGGAGGGTCAAGATGCTGCCCCGGATCTGAGCTTGCTAAGATACAGGTTGCCTTCTTCCTCCACCACCTTGTACAGAATTTCAGATGGAATACCAAGGATGGTGATCAACCCTTTGCATATCCATATGTTGAATTCCAGAGAGGATTGGCACTAAATTTGGATCACTGTTCCACCTGA 1419 43.76 MAVGFWFVLLVGLVGLVLGLILNHFLPLFFKLGHVPKGTFGWPLLGETLCFLKPHPSNSLGAFLQDRCSRFGKVFKSHLFFSPTVVSCDQELNYFILQNEDKLFQCSYPKPIHGILGKISMLVAVGDTHKRLRNVALSLVTTTKTKPEFLNEVERAAIRVLDSWKDKPQIIFCEEARKFTFNVIVKQVLGLTPDDPQTAKILQDFLTFMRGLISLPLYIPGTPYARAVQARIRISSTVKAIIEERRRDAENSSKRDDFLEILLCVDTLSEDEKVSFVLDSLLGGYETTSLLMALAVHFLGKSPTALEQLKLEHQKIRSMKQKDDYLNWDDYKRMDFTQNVIHEALRCGNVVKFVHRKALKDVKFRDYLIPSGWKVLPVFSAVHLDPSLHASALQFHPWRWEGRDQTCKKFTPFGGGSRCCPGSELAKIQVAFFLHHLVQNFRWNTKDGDQPFAYPYVEFQRGLALNLDHCST* 473
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 10163050 10165706 - Vvi12g748 Vvi12g748 773271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g748 472 PANTHER CYTOCHROME P450 724B1 5 467 - -
Vvi12g748 472 SUPERFAMILY Cytochrome P450 35 450 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g748 472 PRINTS P450 superfamily signature 283 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g748 472 PRINTS P450 superfamily signature 339 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g748 472 PRINTS P450 superfamily signature 411 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g748 472 PRINTS P450 superfamily signature 420 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g748 472 PANTHER CYTOCHROME P450 26 5 467 - -
Vvi12g748 472 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 413 422 IPR017972 GO:0005506|GO:0016705
Vvi12g748 472 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g748 472 PRINTS E-class P450 group I signature 272 289 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g748 472 PRINTS E-class P450 group I signature 338 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g748 472 PRINTS E-class P450 group I signature 378 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g748 472 PRINTS E-class P450 group I signature 410 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g748 472 PRINTS E-class P450 group I signature 420 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g748 472 Pfam Cytochrome P450 36 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi12g748 472 Gene3D Cytochrome P450 31 467 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g748 K12639 - vvi:100257922 941.799