Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g841 ATGCAAGTGATGGCCTTGGTTTTGGTTCTCATTTTTGGTTTTTTCATTGGGATTTCAAAAGCTCAACTGAGTGTGGGATTTTACACTGAAACATGCCCAGATGCTGAGTCTATTGTCGGTGCAACTGTTCGAGATGCAGCTCTGTCCAACCCCAATATTCTAGCAGTCTTGCTTAGGCTCCACTTTCATGACTGCTATGTTCAGGGCTGTGATGGCTCAATTCTCATTGACAATGATCCTGATGCTGAGAAGCATGCATTTGGCCACCAAGGTGTTGGAGGCTATGAAGTGATAGAAATTGCCAAGGAAAAGCTGGAATCCCAATGTCCGGGTGTGGTTTCTTGTGCAGATATTGTGGCATTAGCTGCTCGAGATGCTGTGGCCTTGGCTAATGGACCGGCATACCAGGTTCCCACAGGCCGAAGAGATGGCCGTGTCTCCAACATTTCACTGGCAGCTGATATGCCTGATGTGAGTGACTCAATTCAACAGCTGAAATCTAAGTTTTTAGACAGGGGTCTCTCAGAAAAAGACCTTGTGCTCCTCAGTGCTGCACACACCATTGGAACCACAGCATGCTTCTTCATGACAGACCGGCTGTACAACTTTTTTCCGGGTGGGGGATCCGATCCATCTATCAGCCCTGAATTCCTCCCAGAGCTAAAAGCAAAGTGCCCTCAGGATGGTGATGTTAATGTTCGGTTACCAATGGACCAGGGAAGTGGGGAGACATTTGACAAAAAGATTCTGGAAAACATTAGGGGTGGATTTGCTGTGCTGCAGTCAGATGCTAGTCTTATGGAGGATGAAGCAACTAAGAGCGTAATAGACTCCTACTTCGGCCCCCTAAACTCACAATTTGGACCATCTTTTGAGGAAGATTTTGTTAACTCAATGGTGAAAATGGGCCAGATCGGTGTGGAGACAGGTTCTGATGGGGAGATCAGGCGAGTTTGCGGAGCCTTTAATTGA 972 47.02 MQVMALVLVLIFGFFIGISKAQLSVGFYTETCPDAESIVGATVRDAALSNPNILAVLLRLHFHDCYVQGCDGSILIDNDPDAEKHAFGHQGVGGYEVIEIAKEKLESQCPGVVSCADIVALAARDAVALANGPAYQVPTGRRDGRVSNISLAADMPDVSDSIQQLKSKFLDRGLSEKDLVLLSAAHTIGTTACFFMTDRLYNFFPGGGSDPSISPEFLPELKAKCPQDGDVNVRLPMDQGSGETFDKKILENIRGGFAVLQSDASLMEDEATKSVIDSYFGPLNSQFGPSFEEDFVNSMVKMGQIGVETGSDGEIRRVCGAFN* 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 14103615 14106189 - Vvi12g841 Vvi12g841 773364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g841 323 CDD secretory_peroxidase 22 322 IPR033905 GO:0004601|GO:0042744
Vvi12g841 323 PANTHER PEROXIDASE 25-RELATED 6 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g841 323 SUPERFAMILY Heme-dependent peroxidases 22 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi12g841 323 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g841 323 PRINTS Haem peroxidase superfamily signature 113 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g841 323 PRINTS Haem peroxidase superfamily signature 131 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g841 323 PRINTS Haem peroxidase superfamily signature 178 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g841 323 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g841 323 PANTHER PEROXIDASE 6 320 - -
Vvi12g841 323 Gene3D Peroxidase, domain 2 156 302 - -
Vvi12g841 323 Gene3D - 26 323 - -
Vvi12g841 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 178 188 IPR019793 -
Vvi12g841 323 ProSiteProfiles Plant heme peroxidase family profile. 22 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g841 323 Pfam Peroxidase 41 279 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi12g841 323 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g841 323 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g841 323 PRINTS Plant peroxidase signature 93 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g841 323 PRINTS Plant peroxidase signature 112 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g841 323 PRINTS Plant peroxidase signature 131 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g841 323 PRINTS Plant peroxidase signature 177 189 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g841 323 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g841 323 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi12g841 323 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g841 K00430 - vvi:100260726 635.95