Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g845 ATGGGGACAATGGTAAACTACAAGCAATCATCTTCTTTCCATTTTATTTGTGATAGCTATCCTTTGCCTTCATCCTTCATGGCTTCCCTTGAACGAGGCGATCAACTGTCACGTAAAAATATTGAAATTTCCGTTCGTGAGAATCACTTTGTGCCCATTGAACAACACCAAGATCCAAAAGGTGAGGATTTCAACTACGCTAAGAGGGGACAATGGCTTCGTGCTGCTATATTAGGGGCTAATGATGGGTTAGTCTCTGTTGCATCATTGATGATGGGTGTTGGAGCTGTCAAGAGGGATGTCATGGCCATGATTCTTGCTGGTTTTGCTGGGCTAGTTGCTGGAGCTTGTAGTATGGCAATAGGAGAGTTTGTCTCTGTGTATACTCAGCTGGACATAGAAGTGGCTCAAATGAAAAGAGAGAAGGGAACCAACAAAGATAGTAAGAATTTGGAGCTGCCAAATCCTTTTCAGGTTGCTATAACATCTGCCTTGACCTTTGTGGTGGGGGCAATGGTTCCAGTAGTGGCGGCTGCAATCACAAGGGATCATAAGGTGAGGCTTGGGGTGGTGGTTGCTGTGTCGAGCTTGGCATTTTTGGTATTTGGAGGGGTAGGGGCAATTCTGGGGAGGACTCCTGTGGGGTGGTCTTGCGCCAGGGTTCTAGTTGGAGGCTGGATGGCTATGGCTATTACTTCTGGGCTCACCATGTTGATTGGCTCCAGTCATTAA 732 46.58 MGTMVNYKQSSSFHFICDSYPLPSSFMASLERGDQLSRKNIEISVRENHFVPIEQHQDPKGEDFNYAKRGQWLRAAILGANDGLVSVASLMMGVGAVKRDVMAMILAGFAGLVAGACSMAIGEFVSVYTQLDIEVAQMKREKGTNKDSKNLELPNPFQVAITSALTFVVGAMVPVVAAAITRDHKVRLGVVVAVSSLAFLVFGGVGAILGRTPVGWSCARVLVGGWMAMAITSGLTMLIGSSH* 244
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 14203709 14214730 - Vvi12g845 Vvi12g845 773368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g845 243 CDD Nodulin-21 71 213 - -
Vvi12g845 243 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 46 241 - -
Vvi12g845 243 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 46 241 IPR008217 GO:0005384|GO:0030026
Vvi12g845 243 Pfam VIT family 73 150 IPR008217 GO:0005384|GO:0030026
Vvi12g845 243 Pfam VIT family 138 236 IPR008217 GO:0005384|GO:0030026
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g845 K22736 - vvi:100257248 402.134