Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi12randomg19 | ATGAACTCCAAGCACAAGCAGAAGCGGCTGAAGCGGCAACTGCTGAAGCGGAAGCTGCTGGATCGGCGCAACGCCACCTCCGACGACTCCACCACCCTACGCACCAGCTCTCTGGACCTCTCTCCTCTCTCCTCACACCCCAGCTTCCAAATGCAATGGATAGCCGCCATGTCAGACAAAATCTGCCCCTTCCCCGGCCTCTCCCTGGAGGATTTTCTCATTTGGGAGACCTGGACGTGCCTGTCTTCCCTTAGTCTCCTTCCGGAGAAGCAGCCGGTGGCGGAGGAGGTGATCAGAGAGTTTAGAACTAGGGTTAGGCTCACTGATAAAATTGAGGTTGGAAATGAAGAGGATGTGGTAATTGAGAGAAATAACGTTAGTGGAGGGAATGCTGGGATGGGGAAATCTCGTGTTTTTCCTCGAGGTGACAGGCATATGGATTCGTCAGCTCAATGCGGAATTGTTAACCCTTCGGATGGAGAAGAGGAGACGGAAATCGAGAGAAATAAGGTCGATGGGGAGAACATTGGGACAGAAGAGTCTTGTTCTTGCACGTTAAACGATGATGATGAGAATTCGACTTTGGAGTCAGTCTATGGGATTTCGCCAAATGGCCAATTCAAGCGCACCATCAATTCCTGGCAGAGGGGTGAGCTTATAGGAAGTGGATCTTTTGGAAGAGTGTACAAAGGCTATACTGATGATAGAATCATTTTTGTTGTGAAGGAGGCTTCATTGCTTGATCAAGGGAGTCAGGGCAAACAAAGCATTTATCAACTTGAACAGGAGATTTCTCTTTTAAGTCAGTTTGAACATGAGAACATAGTTCGGTATTATGGCACAAACAAGGATGAGACTAAACTTTGTATCTTTCTTGAGCTTGCACCAGAAGGTTCACTGTTAAATCTCTATAGAAAGCATAAACTATTGGAGCCCCAAGTATCTGAATACACAAGGCAGATTTTGAATGGTTTGAGCTATCTACATGGGAAACATGTAATTCACAGGGATGTCAAATGTGCTAACATATTGGTATTTGAAAATCACATTGTGAAACTTGCAGATTTTGGATTGTCAAAGGTTAGTTTCATTAGTAGAGTTACAATCTCTTTTAAAGGGTCTCCATTCTGGACGGCCCCTGAGGTTGTTAATGCGGTGTATAGGAAGAACGATTGTTATGGGCTTGCAGCTGATATATGGAGCCTTGGGTGCACTGTATTAGAGATGTTAACTCAGCAACATCCATACCCTCAATATGAATGGATGCAAGCATTATTTAGGATTGGCCATGGTGAACTTCCTTTTGTTCCTGATTCCTTGTCAATAGATGCTCGAGATTTTATCCTCAAATGCTTGCAAGTCAACCCTAGTGATTGGCCTACTGCTCGTCAGTTACTGGACCATCCATTTGTGAAGAGCCCATTGCACCCTTTCATTGGCCCTGCATCTCCTAGGGCTAATGGAATACGACCTTAA | 1476 | 45.19 | MNSKHKQKRLKRQLLKRKLLDRRNATSDDSTTLRTSSLDLSPLSSHPSFQMQWIAAMSDKICPFPGLSLEDFLIWETWTCLSSLSLLPEKQPVAEEVIREFRTRVRLTDKIEVGNEEDVVIERNNVSGGNAGMGKSRVFPRGDRHMDSSAQCGIVNPSDGEEETEIERNKVDGENIGTEESCSCTLNDDDENSTLESVYGISPNGQFKRTINSWQRGELIGSGSFGRVYKGYTDDRIIFVVKEASLLDQGSQGKQSIYQLEQEISLLSQFEHENIVRYYGTNKDETKLCIFLELAPEGSLLNLYRKHKLLEPQVSEYTRQILNGLSYLHGKHVIHRDVKCANILVFENHIVKLADFGLSKVSFISRVTISFKGSPFWTAPEVVNAVYRKNDCYGLAADIWSLGCTVLEMLTQQHPYPQYEWMQALFRIGHGELPFVPDSLSIDARDFILKCLQVNPSDWPTARQLLDHPFVKSPLHPFIGPASPRANGIRP* | 492 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi12randomg19 | 491 | MobiDBLite | consensus disorder prediction | 22 | 44 | - | - | |
Vvi12randomg19 | 491 | ProSiteProfiles | Protein kinase domain profile. | 214 | 471 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi12randomg19 | 491 | PANTHER | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED | 132 | 474 | - | - | |
Vvi12randomg19 | 491 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 333 | 345 | IPR008271 | GO:0004672|GO:0006468 | |
Vvi12randomg19 | 491 | Pfam | Protein kinase domain | 215 | 471 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi12randomg19 | 491 | SMART | serkin_6 | 214 | 471 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi12randomg19 | 491 | PANTHER | BNAA02G34600D PROTEIN | 132 | 474 | - | - | |
Vvi12randomg19 | 491 | MobiDBLite | consensus disorder prediction | 29 | 44 | - | - | |
Vvi12randomg19 | 491 | SUPERFAMILY | Protein kinase-like (PK-like) | 196 | 481 | IPR011009 | - | |
Vvi12randomg19 | 491 | Gene3D | Transferase(Phosphotransferase) domain 1 | 211 | 479 | - | - | |
Vvi12randomg19 | 491 | ProSitePatterns | Protein kinases ATP-binding region signature. | 220 | 242 | IPR017441 | GO:0005524 |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
76149 | PF00069 | Pkinase | 7.20E-60 | CL0016 | Vvi | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi12randomg19 | - | K13414 | vvi:100264591 | 928.317 |