Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12randomg19 ATGAACTCCAAGCACAAGCAGAAGCGGCTGAAGCGGCAACTGCTGAAGCGGAAGCTGCTGGATCGGCGCAACGCCACCTCCGACGACTCCACCACCCTACGCACCAGCTCTCTGGACCTCTCTCCTCTCTCCTCACACCCCAGCTTCCAAATGCAATGGATAGCCGCCATGTCAGACAAAATCTGCCCCTTCCCCGGCCTCTCCCTGGAGGATTTTCTCATTTGGGAGACCTGGACGTGCCTGTCTTCCCTTAGTCTCCTTCCGGAGAAGCAGCCGGTGGCGGAGGAGGTGATCAGAGAGTTTAGAACTAGGGTTAGGCTCACTGATAAAATTGAGGTTGGAAATGAAGAGGATGTGGTAATTGAGAGAAATAACGTTAGTGGAGGGAATGCTGGGATGGGGAAATCTCGTGTTTTTCCTCGAGGTGACAGGCATATGGATTCGTCAGCTCAATGCGGAATTGTTAACCCTTCGGATGGAGAAGAGGAGACGGAAATCGAGAGAAATAAGGTCGATGGGGAGAACATTGGGACAGAAGAGTCTTGTTCTTGCACGTTAAACGATGATGATGAGAATTCGACTTTGGAGTCAGTCTATGGGATTTCGCCAAATGGCCAATTCAAGCGCACCATCAATTCCTGGCAGAGGGGTGAGCTTATAGGAAGTGGATCTTTTGGAAGAGTGTACAAAGGCTATACTGATGATAGAATCATTTTTGTTGTGAAGGAGGCTTCATTGCTTGATCAAGGGAGTCAGGGCAAACAAAGCATTTATCAACTTGAACAGGAGATTTCTCTTTTAAGTCAGTTTGAACATGAGAACATAGTTCGGTATTATGGCACAAACAAGGATGAGACTAAACTTTGTATCTTTCTTGAGCTTGCACCAGAAGGTTCACTGTTAAATCTCTATAGAAAGCATAAACTATTGGAGCCCCAAGTATCTGAATACACAAGGCAGATTTTGAATGGTTTGAGCTATCTACATGGGAAACATGTAATTCACAGGGATGTCAAATGTGCTAACATATTGGTATTTGAAAATCACATTGTGAAACTTGCAGATTTTGGATTGTCAAAGGTTAGTTTCATTAGTAGAGTTACAATCTCTTTTAAAGGGTCTCCATTCTGGACGGCCCCTGAGGTTGTTAATGCGGTGTATAGGAAGAACGATTGTTATGGGCTTGCAGCTGATATATGGAGCCTTGGGTGCACTGTATTAGAGATGTTAACTCAGCAACATCCATACCCTCAATATGAATGGATGCAAGCATTATTTAGGATTGGCCATGGTGAACTTCCTTTTGTTCCTGATTCCTTGTCAATAGATGCTCGAGATTTTATCCTCAAATGCTTGCAAGTCAACCCTAGTGATTGGCCTACTGCTCGTCAGTTACTGGACCATCCATTTGTGAAGAGCCCATTGCACCCTTTCATTGGCCCTGCATCTCCTAGGGCTAATGGAATACGACCTTAA 1476 45.19 MNSKHKQKRLKRQLLKRKLLDRRNATSDDSTTLRTSSLDLSPLSSHPSFQMQWIAAMSDKICPFPGLSLEDFLIWETWTCLSSLSLLPEKQPVAEEVIREFRTRVRLTDKIEVGNEEDVVIERNNVSGGNAGMGKSRVFPRGDRHMDSSAQCGIVNPSDGEEETEIERNKVDGENIGTEESCSCTLNDDDENSTLESVYGISPNGQFKRTINSWQRGELIGSGSFGRVYKGYTDDRIIFVVKEASLLDQGSQGKQSIYQLEQEISLLSQFEHENIVRYYGTNKDETKLCIFLELAPEGSLLNLYRKHKLLEPQVSEYTRQILNGLSYLHGKHVIHRDVKCANILVFENHIVKLADFGLSKVSFISRVTISFKGSPFWTAPEVVNAVYRKNDCYGLAADIWSLGCTVLEMLTQQHPYPQYEWMQALFRIGHGELPFVPDSLSIDARDFILKCLQVNPSDWPTARQLLDHPFVKSPLHPFIGPASPRANGIRP* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12randomg19 491 MobiDBLite consensus disorder prediction 22 44 - -
Vvi12randomg19 491 ProSiteProfiles Protein kinase domain profile. 214 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi12randomg19 491 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 132 474 - -
Vvi12randomg19 491 ProSitePatterns Serine/Threonine protein kinases active-site signature. 333 345 IPR008271 GO:0004672|GO:0006468
Vvi12randomg19 491 Pfam Protein kinase domain 215 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi12randomg19 491 SMART serkin_6 214 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi12randomg19 491 PANTHER BNAA02G34600D PROTEIN 132 474 - -
Vvi12randomg19 491 MobiDBLite consensus disorder prediction 29 44 - -
Vvi12randomg19 491 SUPERFAMILY Protein kinase-like (PK-like) 196 481 IPR011009 -
Vvi12randomg19 491 Gene3D Transferase(Phosphotransferase) domain 1 211 479 - -
Vvi12randomg19 491 ProSitePatterns Protein kinases ATP-binding region signature. 220 242 IPR017441 GO:0005524
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76149 PF00069 Pkinase 7.20E-60 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12randomg19 - K13414 vvi:100264591 928.317