Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12randomg22 ATGAACTTAACCACTTTATATCTTTTTGAGAACGAGCTTTCTGGTTCAATTCCTCAAGAAATTGGATTTTTGAGATTGCTTTATGATCTTGGCTTGTCATTCAACAATCTCAACGGTTTAATACCAGCTTCCATAGGAAACTTGTCCAACTTAACTTTTTTGTTCCTTAATCACAACGAGCTTAGTGGTGCCATTCCTCTTGAAATGAATAATATCACTCATTTGAAATCTTTACAGTTATTTGAGAATAACTTCATTGGCCAACTACCACAAGAGATATGCCTGGGTAGTGCTCTTGAAAACTTTACGGCCTCTAGGAACCCTTTCAGTGGTCCCATACCAAAGAGCTTGAAAAATTGCACTAATTTATTAAGAGTTCGGCTTGAAAGAAACCAACTTACAGGAGACATAACCGAAAGTTGTGGTGTGTACCCGACCCTAAATTTTATTGATCTAAGCAGCAACAATTTTTATGGTGAGCTTTCTGAGAAATGGGGGCAGTGCCACATGCTCACAAACCTGAAGATCTCCAACAACAATATTTATGGTGCTATACCACCTCAACTTGGGAAAGCAATTCAGTTGCAACAACTTGATCTCTCCACCAATCATCTAAGTGGGAAAGTCCTAAAAGAGTTGGGTATGTTGCCATTATTGTTCAAATTGTTGTTAGCAAACAACAATCTTTCAAGCAGTATTCCTTTGGAATTGGGAAACTTATCCAATCTTGAAATTCTTAACTTGGCATTAAACAACTTAAGCGGTCCAATTCCCAAACAATTGGGAAACTTCTGGAAATTACGGTCCTTCAACTTGAGTGAGAATAGATTTGTGGATAGCATTCCTGACGAAATTGGAATGAACCTGGAAACGTTGAATCTCTCCCATAACGGGCTCTTTGGCACCATCCCACACACTTTTGATGATCTCATAAGCCTGATAGTTGCTAATATATCCTACAATCAGTTGGAAGGTCCTCTCCCCAACATCAAAGCTTTCGCTCCATTTGAGGCATTCAAAAATAATAAAGCAGATGTTGAAGATCTATTTGCAATATGGGCCCATGATGGAGAATTGTTGTATGAGCACATCATACAGGGGACCGACAATTTCAGTTCGAAACAGTGTATCGGCACTGGAGGATATGGTACTGTTTACAAAGCTGAGTTGCCAACAGGTCAGGTTGTTGCTGTGAAAAAACTTCACTCATCACAAGATGGAGATATGGCTGATTTGAAAGCTCTCAAAAGCAAGATTCATGCTTTAACACATATAAGGCATTGCAACATCGTTAAGCTTTATGGCTTCAGTTCATTTGCAGAGATCTCATTTTTGGTTTATGAGTTTATGGAAAAGGGGAGCTTGCGAAACATTCTAAGCAACGACGAAGAAGTAGAAAAATTAGATTGGATTGTGAGGCTAAACAATGTTAAAGGCATGGCTAAAGCTTTATCTTACATGCACCATGATTGCTCACCTCCTATAGTTCATCGAGACATATCGAGCAACAATGTTTTGTTAGATTCAGAATATGAGGCTCATGTATTTGACTTTGGCACGACTAGGCTTTTAAAGTTGGACTCATCTAATTGGACTTCATTTGCAGGAACTTTTGGTTATACTACTCTAGAACTTGCTTACACGATGAAGGTTGATAATAAAACTGATGTTTATAGCTTCGGAGTGGTCACATTGGAAGTAATTATGGGAAGGCATCCTGGAGAACTCATCTCGTCCCTGTTATCATCAGCGTCCTCATCATCCTCATCACCATCAACTGTGGACCATCACCTATTGAATGATGTGATGGACCAGCGCTCCTCACCTCCTGTGAATCAAGTGGCTGAGGAAGTAGTTGTTGTAGTGAAGTTAGCATTTGCATGCTTGCGTGTTAATCCCTAA 1902 39.43 MNLTTLYLFENELSGSIPQEIGFLRLLYDLGLSFNNLNGLIPASIGNLSNLTFLFLNHNELSGAIPLEMNNITHLKSLQLFENNFIGQLPQEICLGSALENFTASRNPFSGPIPKSLKNCTNLLRVRLERNQLTGDITESCGVYPTLNFIDLSSNNFYGELSEKWGQCHMLTNLKISNNNIYGAIPPQLGKAIQLQQLDLSTNHLSGKVLKELGMLPLLFKLLLANNNLSSSIPLELGNLSNLEILNLALNNLSGPIPKQLGNFWKLRSFNLSENRFVDSIPDEIGMNLETLNLSHNGLFGTIPHTFDDLISLIVANISYNQLEGPLPNIKAFAPFEAFKNNKADVEDLFAIWAHDGELLYEHIIQGTDNFSSKQCIGTGGYGTVYKAELPTGQVVAVKKLHSSQDGDMADLKALKSKIHALTHIRHCNIVKLYGFSSFAEISFLVYEFMEKGSLRNILSNDEEVEKLDWIVRLNNVKGMAKALSYMHHDCSPPIVHRDISSNNVLLDSEYEAHVFDFGTTRLLKLDSSNWTSFAGTFGYTTLELAYTMKVDNKTDVYSFGVVTLEVIMGRHPGELISSLLSSASSSSSSPSTVDHHLLNDVMDQRSSPPVNQVAEEVVVVVKLAFACLRVNP* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12randomg22 633 Gene3D Transferase(Phosphotransferase) domain 1 450 633 - -
Vvi12randomg22 633 ProSitePatterns Protein kinases ATP-binding region signature. 377 400 IPR017441 GO:0005524
Vvi12randomg22 633 SUPERFAMILY Protein kinase-like (PK-like) 355 579 IPR011009 -
Vvi12randomg22 633 Pfam Protein kinase domain 372 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi12randomg22 633 Gene3D Phosphorylase Kinase; domain 1 342 449 - -
Vvi12randomg22 633 Gene3D Ribonuclease Inhibitor 1 69 IPR032675 -
Vvi12randomg22 633 ProSiteProfiles Protein kinase domain profile. 371 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi12randomg22 633 SUPERFAMILY RNI-like 2 326 - -
Vvi12randomg22 633 ProSitePatterns Tyrosine protein kinases specific active-site signature. 495 507 IPR008266 GO:0004672|GO:0006468
Vvi12randomg22 633 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 347 633 - -
Vvi12randomg22 633 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 288 343 - -
Vvi12randomg22 633 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 2 286 - -
Vvi12randomg22 633 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 288 343 - -
Vvi12randomg22 633 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 2 286 - -
Vvi12randomg22 633 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 347 633 - -
Vvi12randomg22 633 Gene3D Ribonuclease Inhibitor 161 255 IPR032675 -
Vvi12randomg22 633 Gene3D Ribonuclease Inhibitor 70 160 IPR032675 -
Vvi12randomg22 633 Gene3D Ribonuclease Inhibitor 256 341 IPR032675 -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76152 PF00069 Pkinase 1.50E-36 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12randomg22 - - vri:117928266 822.387