Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi12randomg32 | ATGGAGGATTATCATGTTGCAAAGTTTGTTCAGCAACAAGGACATGAGCTTGGACTTTTTGCTATTTATGATGGACATCTGGGGGATAGTGTCCCTGCCTATCTACAAAAGCATTTGTTCCCAAACATCCTAAAGGAGGAAGAATTTTGGACTGATCCTGCGAGGTCCATTTCTAAAGCCTATGAGAGAACCGACCAGGCAATTCTTTCACACAGTCCTGACTTGGGCAGAGGTGGGTCCACTGCAGTTACTGCAATTCTTATAGATGGCCGAAAGTTATGGGTAGCCAATGTTGGAGATTCACGAGCGGTTTTGTCCAAGAAAGGGCAGGCGAGACAAATGTCCACTGATCATGAGCCCAACACTGAGCGAGATAGCATTGAGGACAGAGGTGGCTTTGTCTCAAATATGCCAGGAGATGTTGCAAGAGTAAATGGGCAGCTGGCAGTTTCTCGTGCTTTTGGAGACAAGAACCTCAAATCACACTTGAGATCAGATCCTGATGTTCAATATGCTGATATTGATGCAGATACTGAGTTTCTCATCCTTGCAAGCGATGGTCTATGGAAGGTGCTGAGTAATGAAGAGGCAATTGATATTGCAAGGAAAACCAGGGACCCACAGAAGGCAGCCAAGCAACTAGTAGCTGAAGCATTGAATAGAGAGAGTAAAGACGATATATCATGTATCGTTGTTCGATTCAGGGGGTAA | 711 | 44.87 | MEDYHVAKFVQQQGHELGLFAIYDGHLGDSVPAYLQKHLFPNILKEEEFWTDPARSISKAYERTDQAILSHSPDLGRGGSTAVTAILIDGRKLWVANVGDSRAVLSKKGQARQMSTDHEPNTERDSIEDRGGFVSNMPGDVARVNGQLAVSRAFGDKNLKSHLRSDPDVQYADIDADTEFLILASDGLWKVLSNEEAIDIARKTRDPQKAAKQLVAEALNRESKDDISCIVVRFRG* | 237 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi12randomg32 | 236 | CDD | PP2Cc | 1 | 234 | IPR001932 | - | |
| Vvi12randomg32 | 236 | SMART | PP2C_4 | 1 | 232 | IPR001932 | - | |
| Vvi12randomg32 | 236 | Pfam | Protein phosphatase 2C | 1 | 227 | IPR001932 | - | |
| Vvi12randomg32 | 236 | Gene3D | - | 1 | 236 | IPR036457 | - | |
| Vvi12randomg32 | 236 | SMART | PP2C_SIG_2 | 2 | 234 | IPR001932 | - | |
| Vvi12randomg32 | 236 | PANTHER | PHOSPHATASE 2C FAMILY PROTEIN | 1 | 235 | - | - | |
| Vvi12randomg32 | 236 | MobiDBLite | consensus disorder prediction | 112 | 130 | - | - | |
| Vvi12randomg32 | 236 | ProSiteProfiles | PPM-type phosphatase domain profile. | 1 | 234 | IPR001932 | - | |
| Vvi12randomg32 | 236 | SUPERFAMILY | PP2C-like | 1 | 235 | IPR036457 | - | |
| Vvi12randomg32 | 236 | PANTHER | PROTEIN PHOSPHATASE 2C | 1 | 235 | IPR015655 | GO:0004722|GO:0006470 | |
| Vvi12randomg32 | 236 | MobiDBLite | consensus disorder prediction | 106 | 130 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi12randomg32 | K17506 | - | vvi:100250772 | 472.626 |