Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi13g1051 | ATGGAGAAGTATTTGAGGGAGAATTTTGACGTTGAGCCGAAGCGAGCTTCGGAGGAAGCTCGGAGACGATGGAGATCGGCCGTGTCTGTCGTCAAGAATCCCCGGAGACGGTTCCGGATGGTTGCCGATCTCGCTAAGCGATCCGAAACGGAAAGAAAGCGCCAGAAAATTCAGGAAAAGATTCGAGTAGCTTTATACGTGCAAAAGGCAGCATTGCATTTCATTGAGGCGGGTCATCGTATTGAATACAACCTCTCCGAAGAGGTTAGGCAAGCTGGTTATGAAATTGAACCAGATGAACTAGCATCTATTGTTCGAGCTCATGATATCAAGGGGCTGGAATTCAATGGTGGAGCTGAAGGATTAGCAGGAAAAGTGTGTGTCTCACTGGATACCGGTGTCAAAACAAGCGAAGTGCATTCTAGACAAAGTATCTATGGCCTCAACCAATATGTTGAAAAGCCTTCTGGAACTTTCTGGATGTTTATCTGGGAAGCCCTGCAAGACCTTACTCTAATAATCCTCATGGTATGTGCCGCGGTTTCTATAGGTGTTGGGATCGCCACAGAGGGATGGCCAAAAGGTATGTACGATGGGTTAGGAATAGTACTCAGTATTTTCTTAGTAGTGATGGTTACTGCAACTAGTGACTACAAGCAGTCCTTGCAATTCAAGGACTTGGACAAGGAGAAGAAAAATATAATTGTTCAGGTGACCAGAGATGGATACAGACAAAAGATTTCTATATATGATTTGGTGGTTGGAGACATTGTTCATCTATCCATTGGAGATCAGGTTCCAGCTGATGGGGTCTTCATATCAGGTCACAGTTTATCAATTGATGAATCAAGCTTGTCAGGTGAGAGTGAGCCGGTGAATATCAACAAACAGAGGCCATTTCTCCTATCTGGAACCAAGGTACAAGATGGGTCTGGGAAAATGCTGGTCACATCAGTCGGTATGAGGACTGAATGGGGAAGATTGATGGTTACTCTGAGTGAAGGGGGAGAAGATGAGACACCACTGCAGGTGAAGCTTAATGGAGTGGCGACCATTATTGGGAAGATTGGTCTGGCTTTTGCTGTGCTGACATTTTTGGTGCTGATGGGACGGTTTCTGCTCCAGAAGGCACTTCACAGCAACATCACAGACTGGTCTTTCAGCGATGCAGTGACAATTTTGAATTATTTTGCTATTGCAGTTACTATAATTGTGGTTGCAGTCCCAGAAGGGCTTCCATTGGCAGTGACATTGAGCCTTGCTTTTGCAATGAAGAAATTGATGAATGCTAAGGCACTCGTGCGGCATTTATCTGCTTCGATAGAAACTAACGACAGTAAAGATGTATTTCACGTTTTGGGTACTCCAACAGAAACAGCTATATTAGAGTTTGGCTTGCATTTAGGTGGTGAGAGTGCCCACTACAAGGAGTCTGAGATAGTGAAGGTTGAGCCTTTCAATTCAGTCAAGAAAAAGATGTCCGTGCTCGTAAGTCTTCCTGCTGGTGGGTTCCGAGCATTCTGCAAAGGCGCATCAGAAATTGTTTTAGAGATGTGCGACAAGATTATTAATACCAATGGAGAATTTGTGTCCCTGTCTGCAGACCAGAGAAAGAACATCACAGATGTCATAAATGGTTTTGCCTGCGAAGCCCTTAGAACTCTATGCTTGGCTTTCAAGGATATAGAAAACAGTTCTAAGGACGATGATATTCCTTATAGTAACTATACACTAATAGCAGTTCTTGGAATCAAGGATCCAGTTCGCCCTGGAGTGAAGGATGCTGTTCGGACTTGTTTAGCTGCTGGGATTACAGTGCGGATGGTCACAGGCGACAATATCAATACAGCAAAAGCCATAGCTAAAGAATGTGGCATATTGACTGATGATGGTCTGGCAATAGAAGGGCCAGATTTTCGTAATAAGAGCCCCCAGGAGATGAAGGAGTTGATACCAAAACTTCAGGTGATGGCTCGATCATTGCCTTTGGACAAGCACACCTTGGTAAGCCAGCTAAGAAATTCATTTAAAGAAGTTGTGGCAGTGACTGGCGATGGGACCAACGATGCTCCTGCTTTGCATGAGGCGGACATTGGACTTGCCATGGGCATAGCAGGAACTGAGGTGGCAAAAGAAAATGCGGATGTGATTATAATGGATGATAACTTCTCGACTATAGTGAATGTTGCCAGATGGGGCCGGTCAGTCTACATAAATATTCAAAAATTTGTGCAGTTCCAGTTAACAGTCAACATTGTTGCTCTCATGATCAACTTTGTTTCTGCATGCATCTCAGGATCTGCTCCTCTTACTGCTGTCCAGTTGCTCTGGGTGAATATGATCATGGACACTCTTGGTGCATTAGCCTTGGCTACAGAGGCTCCAACTGATGGCCTGATGAAACGAGCTCCAGTTGGTAGGAATGCAAATTTCATCACCCGAACCATGTGGAGAAATATCATAGGCCAAAGCATCTATCAACTAGCCGTCCTTTTGGTCTTCACCTTCCAAGGGAAACGGCTTCTAAAGCTCACTGGTTCAGACGCCAGTAAAATTCTTAACACATTCATATTCAATGCCTTCGTCTTTTGCCAGGTATTCAATGAAATAAACAGCCGTGATATGGAGAAGATAAATGTTTTCCAAGACATGTTCAGCAACTGGATATTCATAATCATAGTCGTCTCCTCAGTTACTTTCCAGGCCATAATGGTAGAATTTTTGGGCACTTTCGCCGGAACAGTGCCACTGAGCTGGGAGTTGTGGCTATTAAGCATCTTAATCGGGGCTGTGAGCTTAATCATCGCAGTTATCCTAAAGTGCATTCCCGTCGAACCAACAAAGTACACAGCCATTGCCAAGCATCACGATGGCTATGAACCACTCCCAAGTGGTCCGGACCGGGCATGA | 2910 | 44.64 | MEKYLRENFDVEPKRASEEARRRWRSAVSVVKNPRRRFRMVADLAKRSETERKRQKIQEKIRVALYVQKAALHFIEAGHRIEYNLSEEVRQAGYEIEPDELASIVRAHDIKGLEFNGGAEGLAGKVCVSLDTGVKTSEVHSRQSIYGLNQYVEKPSGTFWMFIWEALQDLTLIILMVCAAVSIGVGIATEGWPKGMYDGLGIVLSIFLVVMVTATSDYKQSLQFKDLDKEKKNIIVQVTRDGYRQKISIYDLVVGDIVHLSIGDQVPADGVFISGHSLSIDESSLSGESEPVNINKQRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATIIGKIGLAFAVLTFLVLMGRFLLQKALHSNITDWSFSDAVTILNYFAIAVTIIVVAVPEGLPLAVTLSLAFAMKKLMNAKALVRHLSASIETNDSKDVFHVLGTPTETAILEFGLHLGGESAHYKESEIVKVEPFNSVKKKMSVLVSLPAGGFRAFCKGASEIVLEMCDKIINTNGEFVSLSADQRKNITDVINGFACEALRTLCLAFKDIENSSKDDDIPYSNYTLIAVLGIKDPVRPGVKDAVRTCLAAGITVRMVTGDNINTAKAIAKECGILTDDGLAIEGPDFRNKSPQEMKELIPKLQVMARSLPLDKHTLVSQLRNSFKEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFSTIVNVARWGRSVYINIQKFVQFQLTVNIVALMINFVSACISGSAPLTAVQLLWVNMIMDTLGALALATEAPTDGLMKRAPVGRNANFITRTMWRNIIGQSIYQLAVLLVFTFQGKRLLKLTGSDASKILNTFIFNAFVFCQVFNEINSRDMEKINVFQDMFSNWIFIIIVVSSVTFQAIMVEFLGTFAGTVPLSWELWLLSILIGAVSLIIAVILKCIPVEPTKYTAIAKHHDGYEPLPSGPDRA* | 970 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 21215049 | 21233597 | - | Vvi13g1051 | Vvi13g1051 | 774837 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi13g1051 | 969 | PANTHER | CATION TRANSPORTING ATPASE | 3 | 443 | - | - | |
Vvi13g1051 | 969 | PANTHER | CATION TRANSPORTING ATPASE | 445 | 952 | - | - | |
Vvi13g1051 | 969 | Pfam | Cation transporting ATPase, C-terminus | 768 | 941 | IPR006068 | - | |
Vvi13g1051 | 969 | Pfam | Cation transporter/ATPase, N-terminus | 116 | 182 | IPR004014 | - | |
Vvi13g1051 | 969 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 3 | 443 | - | - | |
Vvi13g1051 | 969 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 445 | 952 | - | - | |
Vvi13g1051 | 969 | Pfam | Ca2+-ATPase N terminal autoinhibitory domain | 5 | 49 | IPR024750 | GO:0005516 | |
Vvi13g1051 | 969 | Pfam | E1-E2 ATPase | 235 | 428 | - | - | |
Vvi13g1051 | 969 | SUPERFAMILY | Calcium ATPase, transduction domain A | 234 | 329 | IPR008250 | - | |
Vvi13g1051 | 969 | Pfam | Cation transport ATPase (P-type) | 438 | 522 | - | - | |
Vvi13g1051 | 969 | Gene3D | - | 441 | 587 | IPR023299 | GO:0000166 | |
Vvi13g1051 | 969 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 116 | 944 | IPR023298 | - | |
Vvi13g1051 | 969 | PRINTS | P-type cation-transporting ATPase superfamily signature | 281 | 295 | - | - | |
Vvi13g1051 | 969 | PRINTS | P-type cation-transporting ATPase superfamily signature | 580 | 591 | - | - | |
Vvi13g1051 | 969 | PRINTS | P-type cation-transporting ATPase superfamily signature | 602 | 612 | - | - | |
Vvi13g1051 | 969 | PRINTS | P-type cation-transporting ATPase superfamily signature | 683 | 702 | - | - | |
Vvi13g1051 | 969 | PRINTS | P-type cation-transporting ATPase superfamily signature | 707 | 719 | - | - | |
Vvi13g1051 | 969 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 653 | 771 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Vvi13g1051 | 969 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 202 | 628 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Vvi13g1051 | 969 | CDD | P-type_ATPase_Ca_PMCA-like | 142 | 816 | - | - | |
Vvi13g1051 | 969 | Gene3D | - | 16 | 77 | - | - | |
Vvi13g1051 | 969 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 439 | 592 | IPR023299 | GO:0000166 | |
Vvi13g1051 | 969 | SUPERFAMILY | HAD-like | 576 | 788 | IPR036412 | - | |
Vvi13g1051 | 969 | PRINTS | H+-transporting ATPase (proton pump) signature | 540 | 558 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Vvi13g1051 | 969 | PRINTS | H+-transporting ATPase (proton pump) signature | 683 | 699 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Vvi13g1051 | 969 | PRINTS | H+-transporting ATPase (proton pump) signature | 715 | 740 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Vvi13g1051 | 969 | Gene3D | - | 588 | 728 | IPR023214 | - | |
Vvi13g1051 | 969 | Gene3D | - | 132 | 333 | - | - | |
Vvi13g1051 | 969 | SMART | Cation_ATPase_N_a_2 | 118 | 187 | IPR004014 | - | |
Vvi13g1051 | 969 | TIGRFAM | ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type | 443 | 945 | IPR006408 | GO:0005388|GO:0005524|GO:0016020|GO:0070588 | |
Vvi13g1051 | 969 | Gene3D | - | 165 | 439 | - | - | |
Vvi13g1051 | 969 | Gene3D | - | 729 | 942 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi13g1051 | K01537 | - | vvi:100246545 | 1804.65 |