Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g1155 ATGGCGTTGTGCGGGCGCATCAGATCTTCCGGCCTTCCTCTTCTCCAGAAGTTTCTGAAATCCGATTTGATCTCAGCTCATGGATCGGGCGTTCAACGATCCCTCCTTTGTCCTGCTCTCAGTTTTTCCGAGTTCTCAAGGAATTATGCCACTGCATCAGTAGCAAAGGAAGGGAAAGTTAAGGTACCTCTGGTTTTGTTTGGGGGAGCTGGAAACTATGCCTCTGCCTTGTACATTGCAGCAGTAAAAGCTAATGCATTGGACACTGTTGAGTCTGAGATTCTTGACTTTCTTGAAGCTTCAAAGAGAAGTGATAATTTTTCTCAGTTCATGAAGAACTTGTCAGTGTCTAGGGGTGTAAGAGTGAAGGCTTTAACTGCAATTTGTTCTGAAACTAAATTCTCAGATGTCACAAAGAACTTCTTGGTTGTTTTGGCTGAGACTGGAAGACTAAGGAATTTGGAAAGTATAGCCAAGAAATTTTTGGATTTGACCATGGCACACAAGGGAGAAGTTAGAGCTGTTGTTACAACTGTAATTCCCCTTCCAACAGAAGAGGAGAAGGAACTGAAGGAGACACTGCAGGATATAATTGGCCACGGGAAGAAGGTGAAGCTCGAGCAGAAGATCGATCCCAGTATTCTTGGTGGGCTCGTCGTGGAGTTCAGCCAGAAGGTGTTTGATATGTCCATAAAGACCAGATCACAACAGATGGAGAGGTTCCTGCGTGACCCCATCAGCTTCGGTAATCCCTAA 756 44.97 MALCGRIRSSGLPLLQKFLKSDLISAHGSGVQRSLLCPALSFSEFSRNYATASVAKEGKVKVPLVLFGGAGNYASALYIAAVKANALDTVESEILDFLEASKRSDNFSQFMKNLSVSRGVRVKALTAICSETKFSDVTKNFLVVLAETGRLRNLESIAKKFLDLTMAHKGEVRAVVTTVIPLPTEEEKELKETLQDIIGHGKKVKLEQKIDPSILGGLVVEFSQKVFDMSIKTRSQQMERFLRDPISFGNP* 252
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 22844947 22854718 - Vvi13g1155 Vvi13g1155 774941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g1155 251 Gene3D - 68 162 IPR026015 -
Vvi13g1155 251 TIGRFAM ATP_synt_delta: ATP synthase F1, delta subunit 71 241 IPR000711 GO:0015986|GO:0046933
Vvi13g1155 251 PANTHER ATP SYNTHASE SUBUNIT O, MITOCHONDRIAL 39 244 - -
Vvi13g1155 251 Pfam ATP synthase delta (OSCP) subunit 70 240 IPR000711 GO:0015986|GO:0046933
Vvi13g1155 251 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 204 223 IPR020781 GO:0015986|GO:0016020|GO:0046933
Vvi13g1155 251 PANTHER ATP SYNTHASE DELTA CHAIN 39 244 IPR000711 GO:0015986|GO:0046933
Vvi13g1155 251 Hamap ATP synthase subunit delta [atpD]. 65 244 IPR000711 GO:0015986|GO:0046933
Vvi13g1155 251 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 68 171 IPR026015 -
Vvi13g1155 251 PRINTS ATP synthase delta subunit signature 69 88 IPR000711 GO:0015986|GO:0046933
Vvi13g1155 251 PRINTS ATP synthase delta subunit signature 139 150 IPR000711 GO:0015986|GO:0046933
Vvi13g1155 251 PRINTS ATP synthase delta subunit signature 150 164 IPR000711 GO:0015986|GO:0046933
Vvi13g1155 251 PRINTS ATP synthase delta subunit signature 202 217 IPR000711 GO:0015986|GO:0046933
Vvi13g1155 251 PRINTS ATP synthase delta subunit signature 217 235 IPR000711 GO:0015986|GO:0046933
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g1155 K02137 - vvi:100241422 468.003