Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g1182 ATGAAGAAACTGTGCGTGACGGAGCTGCTTGGAGTCAAGCAACTTGAACGCTCACGGGTAGTTAGAAGAGAAGAACTGGATTGTTTCTTGAAGAAATTGGTGGAGAGTGGTGAGAATGGTGAGGCTGTGGATGTTAGGGCTGAGGTGATGAAGCTCACAAACCACAGTACATGCCGGGTGATTCTGAGCGCAAGGTGTTCAGAGGACAATGATGAAGCTGAAAGGTTGATAGAGATGGTGACGGAGTGGGTTGAGTTGGCTGTAAAGATGTCTTTTGGGGATGTGTTTGGCCCTCTGAAGAGGTTGGGTTTCTGGATCTATGGGAGGAAAGCCGTAGAGCTGACACTGAGGTATGATGAGATTCTGGAGAAGATGTTGAAGGAGCACGAAGAGAGGGGAAAGAGAGAAGACAAGGATTTGATGGATGTTCTCTTAGAGGTTTATCAAGATGATAAGGCTGGGATGAAGCTCACCAGAACCCATATCAAGGCTTTCATTCTGGATCTCTTTATGGCAGGCACCAATACCTCAGCAGAAAGCATGCAATGGACAATAGCCGAGCTCATTAACCATCCTGATGTGTTCAAGAAGGTCCGGGAAGAGATAGATTTAGCAGTCGGACGCACTAGACTTGTTGAGGAATCAGACATCCCAAACCTTCCCTACTTGCAAGCAGTTGTTAAGGAAACACTGAGACTACACCCTCCAGCGCCAGTGGCCACAAGAGAATGCCGCAAAAACTGTAAAATTGGTGGATTCAATATACCCGAAAAAACTGCAGTAGCAATCAATCTGTATGCTATTATGAGGGATCCAGAGATATGGGATGATCCTACTGAGTTTAGGCCAGAGAGGTTCTTGGGATAG 867 46.48 MKKLCVTELLGVKQLERSRVVRREELDCFLKKLVESGENGEAVDVRAEVMKLTNHSTCRVILSARCSEDNDEAERLIEMVTEWVELAVKMSFGDVFGPLKRLGFWIYGRKAVELTLRYDEILEKMLKEHEERGKREDKDLMDVLLEVYQDDKAGMKLTRTHIKAFILDLFMAGTNTSAESMQWTIAELINHPDVFKKVREEIDLAVGRTRLVEESDIPNLPYLQAVVKETLRLHPPAPVATRECRKNCKIGGFNIPEKTAVAINLYAIMRDPEIWDDPTEFRPERFLG* 289
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 23193783 23196791 - Vvi13g1182 Vvi13g1182 774968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g1182 288 Pfam Cytochrome P450 2 287 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g1182 288 Gene3D Cytochrome P450 4 288 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g1182 288 SUPERFAMILY Cytochrome P450 3 287 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g1182 288 PANTHER CYTOCHROME P450, FAMILY 705, SUBFAMILY A, POLYPEPTIDE 25-RELATED 1 287 - -
Vvi13g1182 288 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 287 - -
Vvi13g1182 288 PRINTS E-class P450 group I signature 161 178 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g1182 288 PRINTS E-class P450 group I signature 181 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g1182 288 PRINTS E-class P450 group I signature 224 242 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g1182 288 PRINTS E-class P450 group I signature 264 288 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g1182 288 PRINTS P450 superfamily signature 172 189 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g1182 288 PRINTS P450 superfamily signature 225 236 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi8g1377 Vvi13g1182 ECH
Vvi8g1375 Vvi13g1182 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g1182 K23814 - vvi:100247724 568.926