Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g146 ATGGATCCTGACCATGGGAGGTGTTGGGGCACTTCAAAGAAGGACTCTTGGAAGACACTTCTGCTCTTATCTTACCAAAGTCTTGGGGTAGTTTATGGGGACCTTGGCATTTCCCCTCTCTATGTTTACAAGAGCACATTTGCAGAAGATATTCATCATTCAGAAACAAATGAAGAGATTTTTGGAGTTCTTTCCTTTGTCTTCTGGACTCTTACTCTAGTCCCTCTATTCAAGTATGTCTTTATAGTCCTTCGAGCTGATGACAATGGAGAGGGTGGTACTTTTGCTCTGTATTCCTTGATATGCAGGCATGCAAAAGTAAGCCTTCTTCCCAATAGGCAGGTTGCTGATGAAGCACTTTCCACATATAAACTGGAGCATCCTCCAGAGCAAAAGAACAGCTCAAGGGTTAAGATGCTGCTTGAGAAGCACAGAGTGTTGCACACGGCTTTGCTAATTTTGGTTCTTCTTGGCACTTGTATGGTAATTGGAGATGGACTGCTTACTCCAGCCATTTCTGTTTTCTCTGCTGTGTCCGGTCTCGAGTTATCCATGTCCAAAGAACACCATCAGTATGCAGTGATTCCTATTACTTGCTTCATATTAGTGTGTCTATTTGCACTACAACACTATGGCACACATCGGGTTGGATTCTTCTTTGCTCCAGTTGTGTTGATTTGGCTACTATGCATCAGTGCTCTTGGCTTATACAATATATTCCGCTGGAACCCACATGTCTATCAAGCTCTGTCCCCATATTACATGTTCAAATTCTTGAAGAAGACGAGGAAAGATGGATGGATGTCTTTGGGTGGAATTTTATTGTGCATAACAGGCTCAGAGGCAATGTTTGCTGATCTTGGACACTTCTCATACACTGCAATTCAGATTGCCTTCACTTTCTTGGTTTATCCTGCTCTGATATTGGCATATATGGGTCAAGCTGCTTACTTGTCGATACATCATGACAACAGTTACCAGATCAGTTTTTATGTTTCAGTTCCAGAAGCTGTGAGGTGGCCAGTGCTTATAATAGCGATTCTTGCCTCTGTTGTGGGAAGTCAAGCGATCATCAGCGGAACATTCTCTATAATCAACCAGAGCCAGTCACTTGGATGCTTCCCAAGAGTCAAGGTTGTTCATACCTCTGATAAAATACATGGCCAGATCTACATCCCAGAGATCAACTGGATACTTATGATTCTCTGCATTGCTGTGACCATTGGATTCAGAGATACAAAACATATGGGGAATGCATCAGGGTTGGCAGTGATGGCAGTAATGCTAGTGACCACATGCCTCACTTCCTTGGTTATTATCCTCTGTTGGCACAAACCCCCTATTGTAGCTCTCTCTTTCCTACTGTTCTTTGGCTCTATAGAATTACTCTACTTCTCAGCCTCCCTCACAAAGTTCCGTGAGGGTGCCTGGCTCCCCATCCTGCTAGCTCTCTTCCTCATGACCATCATGTATGTTTGGCATTATGCCACCATCAAGAAATATGAATTTGACCTTCACAACAAGGTTTCTTTAGAATGGCTTTTAGCCTTGGGTCCAAGCTTGGGAATAGCTCGAGTACCTGGTATTGGGCTGGTGTTCACTGATCTCACCTCTGGCATCCCGGCAAACTTCTCCCGCTTTGTCACCAACCTCCCCGCCTTTCACCGTGTCCTTGTCTTTGTATGTGTGAAATCAGTGCCAGTCCCTTATGTGCCCCCAGCTGAGAGGTATCTTGTGGGCCGGGTGGGTCCTGCTACTCACCGCTCCTACAGATGCATTGTCCGTTATGGCTATCGTGATGTTCACCAGGATGTTGATTCTTTTGAATCTGAACTTGTTGGTAGGCTGGCTGATTTCATCCGCTATGATTGGGTTCGGACACATGGCACGGACCCATGTATTGAAGATGATGGATCCCAATCTGGGGGATCCTCAAGTGAATGTAGATTGACAGTGATTGGAAATGTAGCATTTTCTGATGTTATTGAGATGGAACCCATTTCTGTTACCAAAAGAAGAGTGAGGTTTGCCATTGATGATGAGTCTGAAACTGATACACGGTCTGAGACTGATGTGCAGTTGCAAGAAGAGTTGGAAGAGTTATGGGCAGCTCAACAATCGGGGACTGCATTCATACTTGGGCACTCACATGTTCGAGCAAAACAAGGATCTTCCCTTGTGAGGAGATTGGCAATCAATGTCGGGTATAATTTCCTGAGGAGGAATTGCCGAGGACCAGATGTAGCTCTCAAGGTGCCACCAGTGTCTCTCCTTGAGGTTGGCATGGTTTATATCGTCTGA 2301 44.89 MDPDHGRCWGTSKKDSWKTLLLLSYQSLGVVYGDLGISPLYVYKSTFAEDIHHSETNEEIFGVLSFVFWTLTLVPLFKYVFIVLRADDNGEGGTFALYSLICRHAKVSLLPNRQVADEALSTYKLEHPPEQKNSSRVKMLLEKHRVLHTALLILVLLGTCMVIGDGLLTPAISVFSAVSGLELSMSKEHHQYAVIPITCFILVCLFALQHYGTHRVGFFFAPVVLIWLLCISALGLYNIFRWNPHVYQALSPYYMFKFLKKTRKDGWMSLGGILLCITGSEAMFADLGHFSYTAIQIAFTFLVYPALILAYMGQAAYLSIHHDNSYQISFYVSVPEAVRWPVLIIAILASVVGSQAIISGTFSIINQSQSLGCFPRVKVVHTSDKIHGQIYIPEINWILMILCIAVTIGFRDTKHMGNASGLAVMAVMLVTTCLTSLVIILCWHKPPIVALSFLLFFGSIELLYFSASLTKFREGAWLPILLALFLMTIMYVWHYATIKKYEFDLHNKVSLEWLLALGPSLGIARVPGIGLVFTDLTSGIPANFSRFVTNLPAFHRVLVFVCVKSVPVPYVPPAERYLVGRVGPATHRSYRCIVRYGYRDVHQDVDSFESELVGRLADFIRYDWVRTHGTDPCIEDDGSQSGGSSSECRLTVIGNVAFSDVIEMEPISVTKRRVRFAIDDESETDTRSETDVQLQEELEELWAAQQSGTAFILGHSHVRAKQGSSLVRRLAINVGYNFLRRNCRGPDVALKVPPVSLLEVGMVYIV* 767
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1390402 1398935 - Vvi13g146 Vvi13g146 773932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g146 766 TIGRFAM kup: potassium uptake protein 23 765 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi13g146 766 PANTHER POTASSIUM TRANSPORTER 2 1 766 - -
Vvi13g146 766 Pfam K+ potassium transporter 25 600 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi13g146 766 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 766 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g146 K03549 - vvi:100232992 1478.77