Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g152 ATGTTCACAAACGTTGTCCAACTTTACATTACGCATTTGATTTTGAAAGAGAAGAGAACTGAAGAAGCCGACAATCTTGTCCGCTTCATTTATAACCAGTGTAAATCCTCTACTAGTACTGATAATTTCATGGATTCATCAGTTGTGAATGTGAGAAATGCAATCAGCAAGAGACGAATGATGATGGGTAGCAGCTGCAACTCAACCATGTCTTCTTCATTTCCAAATCCATTCCTCTTCCTGCATTCTGATAATTCTCAAACCTTGGAGCTTGCTTCACTTCATCTTCATTTACCATTCATCCTCTTGCTCCTTTTCCTTTTCGTTTTCGCTTTTCTCATCCTCTACAAACTCAAACCCAAAACCCTAATCACCAAGCAAATGCCACTGCTCCCTCCTGGTCCAACTCCATGGCCATTAGTTGGGAACCTGCCTGAATTATTCACAAAAAAGCCGGTATTCCGGTGGATACTTGGACTTTTGGAGGAACTCAACACTGAGATTGCATGCATCAAACTGGGCAATGTCCATGTCATTCCCGTGATTTCGCCTGAGATTGCCAGGGAGTTTTTGAAGAAACATGATGCAGTGTTTGCATCCAGACCTATTACAATGGCGTCCCATCACTTGAGCAGAGGGTTCTTGACAACAGCTCTTTCTCCATGGGGAGAGCATACTGATAATTTCATGGACTCATCAGTTGTGAATGTGAGAAATGCAGTCAGACAATACACGGGAAATATCGTTAGGAAGATGATGTTCAGCAGAAGGTACTTCGGAGAAGGAAGGAAAGATGGAGGGCCTGGACTTGAAGAAGAAGAACACGTCAACTCCCTCTTTACTTCGCTTGCTTACCTATATGCATTCTCTCCATCTGATTACCTTCCATGCCTGAGAGTCTTCGACTTAGATGGCCATGAGAAGATGGTAAAAGAGGCTTTAAGCATCATCAGCAAGCATCATGATCCGATAGTGGATGACAGAATAATACAATGGAGGAATGGGGAGAAGAAGGAGGTTGAGGACATACTCGATGTTTTCATTACAATCAGCGACACAAAGGGAAAACCATTGCTATCAGTAGAAGAGATCAAAGCCCAACTCATAGAACTGATGATTGAAATAGTGGATAATCCAGCGCATGCAGCTGAGTGGGCAATGGCAGAAATGATCAATCAACCCGAGATTATGCAGAAGGCCGTGGAAGAAATCGATAGAGTGGTTGGAAAGGATAGACTTGTTCAAGAATCCGATATCGCGCAGCTCAAATATGTTAAAGCCTGTGCTAGGGAAGCTCTGCGACTTCACCCCATAGCACCATTCAACGTGCCCCATGTGTCCATGGCGGACGCTGTTGTGGCCGGCTACTTCATCCCCAAAGGCAGCCATGTCCTGCTGAGCCGGGTAGGGCTTGGACGGAACCCTAGAGTGTGGGAAGAGCCATTGAAGTTTAAACCAGAGCGGCATATGAATGATGAAGTGGTGGATTTAGCTGAGTCTGAGCTTCGGTTCATTTCATTTAGTACTGGGAGACGCGGGTGTCCTGGAACTGCCTTAGGGACAGCCTTGACAGTTACACTCTTGGCGAGACTCCTTCAATGTTTTTCGTGGAGTGTGCCACCGAACCAGAACCAAATTGACCTCAAAGAATCCATGAACGAGCTCTTTCTAGCCAAGCCTCTCCATGCTCATGCAAAACCACGCTTTCATGCTTCCATGTATGGGAATTGA 1731 45.18 MFTNVVQLYITHLILKEKRTEEADNLVRFIYNQCKSSTSTDNFMDSSVVNVRNAISKRRMMMGSSCNSTMSSSFPNPFLFLHSDNSQTLELASLHLHLPFILLLLFLFVFAFLILYKLKPKTLITKQMPLLPPGPTPWPLVGNLPELFTKKPVFRWILGLLEELNTEIACIKLGNVHVIPVISPEIAREFLKKHDAVFASRPITMASHHLSRGFLTTALSPWGEHTDNFMDSSVVNVRNAVRQYTGNIVRKMMFSRRYFGEGRKDGGPGLEEEEHVNSLFTSLAYLYAFSPSDYLPCLRVFDLDGHEKMVKEALSIISKHHDPIVDDRIIQWRNGEKKEVEDILDVFITISDTKGKPLLSVEEIKAQLIELMIEIVDNPAHAAEWAMAEMINQPEIMQKAVEEIDRVVGKDRLVQESDIAQLKYVKACAREALRLHPIAPFNVPHVSMADAVVAGYFIPKGSHVLLSRVGLGRNPRVWEEPLKFKPERHMNDEVVDLAESELRFISFSTGRRGCPGTALGTALTVTLLARLLQCFSWSVPPNQNQIDLKESMNELFLAKPLHAHAKPRFHASMYGN* 577
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1456750 1467068 - Vvi13g152 Vvi13g152 773938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g152 576 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 229 573 - -
Vvi13g152 576 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 11 55 - -
Vvi13g152 576 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 102 226 - -
Vvi13g152 576 Pfam Cytochrome P450 233 560 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g152 576 Pfam Cytochrome P450 132 219 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g152 576 PRINTS E-class P450 group I signature 186 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g152 576 PRINTS E-class P450 group I signature 383 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g152 576 PRINTS E-class P450 group I signature 426 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g152 576 PRINTS E-class P450 group I signature 467 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g152 576 PRINTS E-class P450 group I signature 504 514 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g152 576 PRINTS E-class P450 group I signature 514 537 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g152 576 PANTHER PHENYLALANINE N-MONOOXYGENASE 229 573 - -
Vvi13g152 576 PANTHER PHENYLALANINE N-MONOOXYGENASE 102 226 - -
Vvi13g152 576 PANTHER PHENYLALANINE N-MONOOXYGENASE 11 55 - -
Vvi13g152 576 PRINTS P450 superfamily signature 392 405 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g152 576 PRINTS P450 superfamily signature 427 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g152 576 PRINTS P450 superfamily signature 505 514 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g152 576 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 507 516 IPR017972 GO:0005506|GO:0016705
Vvi13g152 576 SUPERFAMILY Cytochrome P450 132 568 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g152 576 Gene3D Cytochrome P450 124 573 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g152 K12153 - vvi:100265709 951.814