Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g153 ATGAAATGGAGGAATGGGGAGAAGAAGGAGGTTGAGGACACACTCGATGTTTTCCTTACAATCAGGGACACAAAGGGAAAACCATTGCTATCAGTAGAAGAGATCAAAGCCCAACTCATAGAACTGATGATTGAAATAGTGGACAATCCAGCGCATGCAGCTGAGTGGGCAATGGCAGAAATGATCGATCAACCCGAGATTATGCAGAAGGCCGTAGAAGAAATCGATAGAGTGGTTGGAAAGGATAGACTTGTTCAAGAATCCGATATCGCGCAGCTCAAATATGTTAAAGCCTGTGCTAGGGAAGCTCTGCGACTTCACCCCATAGCACCATTCAACGTGCCCCATGTGTCCATGGCGGACGCTGTTGTGGCCGGCTACTTCATCCCCAAAGGCAGCCATGTCCTGCTGAGCCGGGTAGGGCTTGGACGGAACCCTAGAGTGTGGGAAGAGCCATTAAAGTTTAAACCAGAGCGGCATATGAATGATGAAGTGGTGGATTTAGCTGAGCCTGAGCTTCGGTTCATTTCATTTAGTACTGGGAGACGCGGGTGTCCTGGAACTGCCTTAGGGACAGCCTTGACAGTTACACTCTTGGCGAGACTCCTTCAATGTTTTTCGTGGAGTGTGCCACCGAACCAGGACCAAATTGACCTCACAGAATCAATGAACGAGCTCTTTCTAGCCAAGCCTCTCCATGCTCATGCAAAACCACGCTTGCCTGCTTCCATGTATGGGAATTGA 744 49.06 MKWRNGEKKEVEDTLDVFLTIRDTKGKPLLSVEEIKAQLIELMIEIVDNPAHAAEWAMAEMIDQPEIMQKAVEEIDRVVGKDRLVQESDIAQLKYVKACAREALRLHPIAPFNVPHVSMADAVVAGYFIPKGSHVLLSRVGLGRNPRVWEEPLKFKPERHMNDEVVDLAEPELRFISFSTGRRGCPGTALGTALTVTLLARLLQCFSWSVPPNQDQIDLTESMNELFLAKPLHAHAKPRLPASMYGN* 248
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1467797 1469392 - Vvi13g153 Vvi13g153 773939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g153 247 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 178 187 IPR017972 GO:0005506|GO:0016705
Vvi13g153 247 Gene3D Cytochrome P450 1 243 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g153 247 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 2 244 - -
Vvi13g153 247 SUPERFAMILY Cytochrome P450 6 239 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g153 247 PANTHER PHENYLALANINE N-MONOOXYGENASE 2 244 - -
Vvi13g153 247 Pfam Cytochrome P450 8 231 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g153 247 PRINTS P450 superfamily signature 63 76 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g153 247 PRINTS P450 superfamily signature 98 109 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g153 247 PRINTS P450 superfamily signature 176 185 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g153 247 PRINTS E-class P450 group I signature 54 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g153 247 PRINTS E-class P450 group I signature 97 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g153 247 PRINTS E-class P450 group I signature 138 162 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g153 247 PRINTS E-class P450 group I signature 175 185 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g153 247 PRINTS E-class P450 group I signature 185 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g153 - K12153 vvi:100255415 481.1