Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g156 ATGTCATGCGTGCCCACGTCAATATTTAAATCTTACATCCTTCTAATGGGATCGGACGTAAAATTAATTAATTATCATTATTATTTTAATATGAAATTCTTGAAAATAATTGAAAAGTATTTTTTAAAACACCCAAGTTGTTTTTCTGTCGATAAGAGAACTGAAGAAGCCGACAATCTTGTCCGCTTCATTTATAACCAAGCTTGCTTTACTTCGAATTCATCTGCATTGACTGTTCATTTTCTTGCTCATCTTCCTTTTCCTTTTCGCTTTTATTTGTTGTTGGGCTCCCTCGTATGTGGGGAAGTGGGCCCCATGTGCTTAGGGCCAAGTCAGGAGATTTTGAAGGAACATGATGCAGTGTTTGCATCCAGACCTATTACAATGGCGTCCCATCACTTGAGCAGAGGGTTCCTGACAACAGCTCTTTCTCCATGGGGAGAGCACCATAATTTTACGGACTCATCGGTTGTGAATGTGAGAAATGCAGTCAGACAATACACAGGAAATGTGGTTAGGAAGATGATGTTCAGCAGAAGGTACTTTGGGGAAGGAAGGAAAGATGGAGGGCCTGGACTTGAAGAAGAAGAACACGTAAACTCCCTCTTTACCACGCTTGTTTACCTATATGTATTCTCTCCATCTGATTACCTTCCATGCCTGAGAGTCTTCGACTTAGATGGCCATGAGAAGATGGTAAAAGAGGCTTTGAGCATCATCAACAAGCATCATGATCCGATAGTGGATGAGAGAATAATACAATGGAGGAATGGGGAGAAGAAGGAGGTTGAGGACATACTCGATGTTTTCATTACAATCAGCGACACAAAGGGAAAACCATTGCTATCAGTAGAAGAGATCAAAGCCCAACTCATAGAACTGATGATTGAAATAGTGGACAATCCAGCGCATGCAGCTGAGTGGGCAATGGCAGAAATGATCAATAAACCCGAGATTATGCAGAAGGCCGTGGAAGAAATCGATAGAGTGGTTGCAAAGGATAGACTTGTTCAAGAATCCGATATCGCGCAGCTCAAATATGTTAAAGCCTGTGCTAGGGAAGCTCTGCGGCTTCACCCCATGGCACCATTCAACGTGCCCCATGTGTCCATGGCGGACGCTGTTGTGGCCGGCTACTTCATCCCCAAAGGCAGCCATGTCCTGCTGAGCCGGGTAGGGCTTGGACGGAACCCTAGAGTGTGGGAAGAGCCATTAAAGTTTAAACCAGAGCGGCATATGAATGATGAAGTGGTGGATTTAGCTGAGCCTGAGCTTCGGTTCATTTCATTTAGTACTGGGAGACGCGGGTGTCCTGGAACTGCCTTAGGGACAGCGTTGACAGTTACACTCTTGGCGAGACTCCTTCAATGTTTTTCGTGGAGTGTGCCACCGAACCAGGACCAAATTGACCTCACAGAATCAATGAACGAGCTCTTTCTAGCCAAGCCTCTCCATGCTCATGCAAAACCACGCTTGCCTGCTTCCATGTATGGGAATTGA 1500 44.8 MSCVPTSIFKSYILLMGSDVKLINYHYYFNMKFLKIIEKYFLKHPSCFSVDKRTEEADNLVRFIYNQACFTSNSSALTVHFLAHLPFPFRFYLLLGSLVCGEVGPMCLGPSQEILKEHDAVFASRPITMASHHLSRGFLTTALSPWGEHHNFTDSSVVNVRNAVRQYTGNVVRKMMFSRRYFGEGRKDGGPGLEEEEHVNSLFTTLVYLYVFSPSDYLPCLRVFDLDGHEKMVKEALSIINKHHDPIVDERIIQWRNGEKKEVEDILDVFITISDTKGKPLLSVEEIKAQLIELMIEIVDNPAHAAEWAMAEMINKPEIMQKAVEEIDRVVAKDRLVQESDIAQLKYVKACAREALRLHPMAPFNVPHVSMADAVVAGYFIPKGSHVLLSRVGLGRNPRVWEEPLKFKPERHMNDEVVDLAEPELRFISFSTGRRGCPGTALGTALTVTLLARLLQCFSWSVPPNQDQIDLTESMNELFLAKPLHAHAKPRLPASMYGN* 500
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1519992 1526390 - Vvi13g156 Vvi13g156 773942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g156 499 Pfam Cytochrome P450 155 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g156 499 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 111 150 - -
Vvi13g156 499 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 153 496 - -
Vvi13g156 499 PRINTS E-class P450 group I signature 110 131 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g156 499 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g156 499 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g156 499 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g156 499 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g156 499 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g156 499 SUPERFAMILY Cytochrome P450 112 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g156 499 Gene3D Cytochrome P450 109 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g156 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Vvi13g156 499 PANTHER PHENYLALANINE N-MONOOXYGENASE 153 496 - -
Vvi13g156 499 PANTHER PHENYLALANINE N-MONOOXYGENASE 111 150 - -
Vvi13g156 499 PRINTS P450 superfamily signature 315 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g156 499 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g156 499 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g156 - K12153 vvi:100241541 740.725