Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi13g157 | ATGAATATTTCTTATTGTATTAGAAAAAGATACCAAGTACTTATTATGCAGAAGGTCATGGAAGAAATCGATAGAGTGGTTGGAAAGGAGAGACTTGTTAAAGAATTCGATATTATGCAGCTCAAATATGTTAAGGCATGTGGAAGGGAAGCTATGCGTCTTCACCCCATGTCATCATTCAATGACCCCCATCTGTCCATGGTGGATGCTATTGTAGCCGGCTACTTCATCCCTAAAGGCAGTCATGTCCTACTGAACCAGGTAGGGCTTGGGCGAAACCCTAAAGTTTGGGAAGAGCCATTAAGGTTCAAACCAGAGCGGCATATGAATGATGATGTGTTGGATTTAGCTGAGCCTGAGGTTCGATTCATTTCATTTAGTGCTAAGAGACAATGGTGCTTTGGAACTGCCCTAGGGACAACATTGACAGAGGGATCCAAACTATATGGTTCTGCACCTTCACATTTACCATGTGTCACAAAATGGAGGCATTTTTTTTATTGGGTTAGAACAAATTTTATCCTCTTAAGATCACTGACAAGAGATTACATTATCAAATTCAATTGTTTGGATATGGGTCGACCGTATTTCCCTAAATATTATACCAATTTATCCTACCAGACCATGCCACCCCTCAAATGTATGGGAGGTTTCTCATGCATCCTAGTACTGAAGATCAGCAAGAGACAAATGATGATGGGTAGCAGCTGCAACTCAACCATGTCTTCTTCATTTCCAAATTCATTCCTCTTCCTGCTCTCTCATAATTCTGAAACCTTGAAGCTCGTTTCACTTCATCTTCATTTACCATTCATCCTCTTGCTCCTTTTCCTTTTCTTTTTCGCTTTTCTTATCCTCTACAAACTCAAACCCAAAACCCTAATCACCAAGCCAATGCCACTGCTCCCTCCTGGCCCAACTCCATGGCCATTACCAGCAAGACATATCCATAATTTTACGGAATCATCGGTTGTGAATGTGAGAAATACAGTCAGACAATACACAGGAAATGTGGTTAGGAAGATGATGTTCAGCAGAAGGTACTTTGGGGAAGGAAGGAAAGATGGAGGGCCTGGACTTGAAGAAGAAGAACACGTAAACTCCCTCTTTACCACGCTTGCTTACCTATATGTATTCTCTCCATCTGATTACCTTCCATGCCTGAGAGTCTTCGACCTAGATGGCCATGAGAAGATGGTAAAAGAGGCTTTGAGAATCATCAACAAGCATCATGATCCGATTGTGGATGAAAGAATAATACAATGGAGAAATGGGGAGAAGAAGGAGGTTGAGGACATACTCGATGTTTTCATTACAATCAGCGACACAAAGGGAAAACCATTGCTATCAGTAGAAGAGATCAAAGCCCAACTCATAGAACTGATGATTGAAATAGTGGATAATCCAGCGCATGCAGCTGAGTGGGCAATGGCAGAAATGATCAATCAACCCGAGATTATGCAGAAGGCCGTAGAAGAAATCGATAGAGTGGTTGGAAAGGATAGACTTGTTCAAGAATCCGATATCGCGCAGCTCAAATATGTTAAAGCCTGTGCTAGGGAAGCTCTGCGGCTTCACCCCATAGCACCATTCAACGTGCCCCATGTGTCCATGGCGGACGCTGTTGTGGCCGGCTACTTCATCCCCAAAGGCAGCCATGTCCTGCTGAGCCGGGTAGGGCTTGGACGGAACCCTAGAGTGTGGGAAGAGCCATTAAAGTTTAAACCAGAGCGGCATATGAATGATGAAGTGGTGGATTTAGCTGAGCCTGAGCTTCGGTTCATTTCATTTAGTACTGGGAGACGCGGGTGTCCTGGAACTGCCTTAGGGACAGCCTTGACAGTTACACTCTTGGCGAGACTCCTTCAATGTTTTTCGTGGAGTGTGCCACCGAACCAGGACCAAATTGACCTCACAGAATCAATGAACGACCTCTTTCTAGCCAAGCCTCTCCATGCTCATGCAAAACCACGCTTGCATGCTTCCATGTATGGGAATTGA | 2001 | 44.03 | MNISYCIRKRYQVLIMQKVMEEIDRVVGKERLVKEFDIMQLKYVKACGREAMRLHPMSSFNDPHLSMVDAIVAGYFIPKGSHVLLNQVGLGRNPKVWEEPLRFKPERHMNDDVLDLAEPEVRFISFSAKRQWCFGTALGTTLTEGSKLYGSAPSHLPCVTKWRHFFYWVRTNFILLRSLTRDYIIKFNCLDMGRPYFPKYYTNLSYQTMPPLKCMGGFSCILVLKISKRQMMMGSSCNSTMSSSFPNSFLFLLSHNSETLKLVSLHLHLPFILLLLFLFFFAFLILYKLKPKTLITKPMPLLPPGPTPWPLPARHIHNFTESSVVNVRNTVRQYTGNVVRKMMFSRRYFGEGRKDGGPGLEEEEHVNSLFTTLAYLYVFSPSDYLPCLRVFDLDGHEKMVKEALRIINKHHDPIVDERIIQWRNGEKKEVEDILDVFITISDTKGKPLLSVEEIKAQLIELMIEIVDNPAHAAEWAMAEMINQPEIMQKAVEEIDRVVGKDRLVQESDIAQLKYVKACAREALRLHPIAPFNVPHVSMADAVVAGYFIPKGSHVLLSRVGLGRNPRVWEEPLKFKPERHMNDEVVDLAEPELRFISFSTGRRGCPGTALGTALTVTLLARLLQCFSWSVPPNQDQIDLTESMNDLFLAKPLHAHAKPRLHASMYGN* | 667 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 13 | 1527054 | 1539043 | - | Vvi13g157 | Vvi13g157 | 773943 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi13g157 | 666 | Gene3D | Cytochrome P450 | 13 | 143 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi13g157 | 666 | Gene3D | Cytochrome P450 | 311 | 663 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi13g157 | 666 | SUPERFAMILY | Cytochrome P450 | 15 | 140 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi13g157 | 666 | PRINTS | E-class P450 group I signature | 334 | 352 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi13g157 | 666 | PRINTS | E-class P450 group I signature | 473 | 499 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi13g157 | 666 | PRINTS | E-class P450 group I signature | 516 | 534 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi13g157 | 666 | PRINTS | E-class P450 group I signature | 557 | 581 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi13g157 | 666 | PRINTS | E-class P450 group I signature | 594 | 604 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi13g157 | 666 | PRINTS | E-class P450 group I signature | 604 | 627 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi13g157 | 666 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 597 | 606 | IPR017972 | GO:0005506|GO:0016705 | |
| Vvi13g157 | 666 | PRINTS | P450 superfamily signature | 482 | 495 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi13g157 | 666 | PRINTS | P450 superfamily signature | 517 | 528 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi13g157 | 666 | PRINTS | P450 superfamily signature | 595 | 604 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi13g157 | 666 | PANTHER | PHENYLALANINE N-MONOOXYGENASE | 319 | 663 | - | - | |
| Vvi13g157 | 666 | PANTHER | PHENYLALANINE N-MONOOXYGENASE | 14 | 143 | - | - | |
| Vvi13g157 | 666 | Pfam | Cytochrome P450 | 321 | 650 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi13g157 | 666 | Pfam | Cytochrome P450 | 15 | 139 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi13g157 | 666 | SUPERFAMILY | Cytochrome P450 | 316 | 658 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vvi13g157 | 666 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 14 | 143 | - | - | |
| Vvi13g157 | 666 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 319 | 663 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi13g157 | K12153 | - | vvi:100263812 | 691.034 |