Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g191 ATGGATTTATTGGTTGTACCGGTTTTCCAAAAAATCGATAATTTCAATGGGAATTTCTTGTGCAGCAACAAGAAGAGCTGTCAAACCATCTTCTCTGCTCTTGATAATGCCAAGACTCAACTCTACCATTTCAAGGCCATTGTCATAGCAGGGATGGGGTTCTTCACTGATGCTTATGATCTCTTTTGCATCACTGCTGTCACAAAGCTAATAGGCCGCCTGTATTACTATGATCCCATCAAGAATGAGCCAGGGAAATTGCCTACTAATGTGAGTAATGCCATTACTGGTGTGGCCTTATGTGGAACACTGGCTGGGCAACTCTTCTTTGGCTGGCTAGGTGACAAGCTTGGGAGGAAGCATGTCTATGGGATCACTCTTGTCACCATGGTGGGATGTGCTGTGGCATCAGGCCTTTCCTTTGGCTCCACAGCTCATAGCGTCATCGCTTCACTCTGCTTCTTCCGGTTCTGGCTGGGGTTTGGCATTGGAGGGGACTACCCCCTCTCTGCCGTCATCATGTCTGAGTATGCTAATCAAAAAACCCGAGGCGCTTTTATTGCTGCAGTGTTTGCAATGCAGGGGATAGGCATTTTGGTTGCAGGGGCTGTGTCCATGATTGTTTCCAAGGCCTTCTTGGTTGCTTACAAAGCTGAAGTGTTTTCCCAGAACCATGTCTTGTCTACTCAGCCACAAGGGGACTTTGTTTGGCGGATTGTCCTCATGTTTGGTGCTGTCCCTGCTATGCTGACCTACTACTGGCGGATGAAAATGCCGGAAACCGCCAGGTTCACAGCCTTGGTTAAGGGAAACCATGAGAAGGCAGCTGTAGATATGGCAAAAGTACTTGAACAGGACATAGTTGTAGAAGAATCAAAACCGAAAATTCCAGTAACTCCCAGCCCTTCATACGGGTTGTTGTCCAGGGAGTTTGTTAAGAGGCATGGTCTTCAGCTTCTAGGGACTACCAGCACCTGGTTCTTGTTGGATATCGCCTTCTACAGCCTTCAACTCACACAGAAAGACATCTACCCTGCAATAGGACTAGTACCAAAGGCCTCGACAATGAATGCAATAGAGGAGGTGTACAAAATCTCCAAGGCAATGTTCCTGGTTGCCCTCTTTGCAACTGTACCTGGGTACTGGTTCACTGTTTTCCTCATAGATAGGATTGGAAGATTCATAATCCAGCTAGGTGGGTTCCTCCTGATGTCCATTTTCATGGCGTGCCCCAAGGAGTCAACCAATGAATTCTGTGAGGGTAAACCATACTTGTTTGCAGTTTTATATGGGCTCACCTTGTTCTTTGCCAACTTTGGACCAAACAGCACAACCTTCATTGTGCCAGCAGAGCTTTTCCCGGCCAGGTTCAGGTCGACGTGCCATGGTATCTCAGCTGCAGCAGGGAAAGCAGGGGCCATTATAGGGGCATTTCTGGTGCAGAGTTATACTCAGAATGTGGGTGATATCAAGAGGGCAATTGTGGCTTTGTCTATGGTGAATTTGATTGGGTTCTTCTTGTCTTTCTTGATTCCAGAAACAAAAGGCAAGTCACTAGAACAACTCTCTGGGGAGGACCAGAATGGAGGTGATGGTGAAGGAGGAGTCAAAACAGATGAAAAAGTTTAG 1629 46.96 MDLLVVPVFQKIDNFNGNFLCSNKKSCQTIFSALDNAKTQLYHFKAIVIAGMGFFTDAYDLFCITAVTKLIGRLYYYDPIKNEPGKLPTNVSNAITGVALCGTLAGQLFFGWLGDKLGRKHVYGITLVTMVGCAVASGLSFGSTAHSVIASLCFFRFWLGFGIGGDYPLSAVIMSEYANQKTRGAFIAAVFAMQGIGILVAGAVSMIVSKAFLVAYKAEVFSQNHVLSTQPQGDFVWRIVLMFGAVPAMLTYYWRMKMPETARFTALVKGNHEKAAVDMAKVLEQDIVVEESKPKIPVTPSPSYGLLSREFVKRHGLQLLGTTSTWFLLDIAFYSLQLTQKDIYPAIGLVPKASTMNAIEEVYKISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSIFMACPKESTNEFCEGKPYLFAVLYGLTLFFANFGPNSTTFIVPAELFPARFRSTCHGISAAAGKAGAIIGAFLVQSYTQNVGDIKRAIVALSMVNLIGFFLSFLIPETKGKSLEQLSGEDQNGGDGEGGVKTDEKV* 543
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1809331 1811147 - Vvi13g191 Vvi13g191 773977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g191 542 ProSiteProfiles Major facilitator superfamily (MFS) profile. 46 516 IPR020846 GO:0022857
Vvi13g191 542 MobiDBLite consensus disorder prediction 520 542 - -
Vvi13g191 542 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 29 534 - -
Vvi13g191 542 CDD MFS_PhT 47 515 - -
Vvi13g191 542 TIGRFAM 2A0109: phosphate:H+ symporter 33 525 IPR004738 GO:0005315|GO:0006817|GO:0016021
Vvi13g191 542 Gene3D MFS general substrate transporter like domains 42 537 IPR036259 -
Vvi13g191 542 PANTHER PHOSPHATE TRANSPORTER 29 534 - -
Vvi13g191 542 Pfam Sugar (and other) transporter 47 522 IPR005828 GO:0016021|GO:0022857|GO:0055085
Vvi13g191 542 SUPERFAMILY MFS general substrate transporter 33 522 IPR036259 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g191 K08176 - vvi:100255410 999.193