Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g202 ATGGCAACTGGAAGTGTGAGAGAGGTTCTTCCACCAGCTCTTGATTCTACCTCAGAGCCACCCCCACTGTTTGATGGAACAACAAGGCTGTATATATCTTACACTTGCCCATATGCGCAGCGTGTGTGGATTACCCGAAATTGTAAGGGATTGCAGGAGAAGATCAAATTGGTTCCTATTGATTTGCAAAATAGGCCTGCTTGGTACAAGGAGAAAGTCTACCCAGCAAACAAGGTGCCATCTCTGGAACACAATAATGAAGTGAAAGGAGAGAGTCTGGATTTGATCAAATACATTGACAGTAACTTTGAAGGGCCTTCACTGTTCCCTGATGATCCTGCCAAGAGGGAGTTTGCAGAAGAGTTGCTGGCCTACACTGACTCATTCAGTAAAGCTGTGATGACTTTATTGAAGGGTGATGGAGTAGATGAAGCTGGTGCTGCCTTTGATTACATTGAGATGGCTCTCTCCAAATTCGAGGATGGACCTTTTTTCCTTGGCCAGTTCAGTCTGGTAGATATAGCATATGCTCCATTTGTTGAGAGATTTGTGCCGTTCTTACGGGAGGTGAAGAAGTATGATGCGATGGCAGGCAGGCCAAAACTGGAAGCATGGTTTGAGGAGTTGAGCAAGAACGAAGGATTCCAGCAAACTCGGCGTGAGCCAAAGGAGCTTGTTGAAGCCTACAAGAAACGCTTTGCGGCTCACCTCTGA 714 46.22 MATGSVREVLPPALDSTSEPPPLFDGTTRLYISYTCPYAQRVWITRNCKGLQEKIKLVPIDLQNRPAWYKEKVYPANKVPSLEHNNEVKGESLDLIKYIDSNFEGPSLFPDDPAKREFAEELLAYTDSFSKAVMTLLKGDGVDEAGAAFDYIEMALSKFEDGPFFLGQFSLVDIAYAPFVERFVPFLREVKKYDAMAGRPKLEAWFEELSKNEGFQQTRREPKELVEAYKKRFAAHL* 238
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1939188 1954420 - Vvi13g202 Vvi13g202 773988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g202 237 SFLD Main (cytGST) 29 211 - -
Vvi13g202 237 MobiDBLite consensus disorder prediction 1 20 - -
Vvi13g202 237 Pfam Glutathione S-transferase, N-terminal domain 30 106 IPR004045 -
Vvi13g202 237 SFLD Glutathione Transferase (cytosolic) 29 211 IPR040079 -
Vvi13g202 237 SUPERFAMILY Thioredoxin-like 20 108 IPR036249 -
Vvi13g202 237 SUPERFAMILY GST C-terminal domain-like 103 234 IPR036282 -
Vvi13g202 237 PANTHER GLUTATHIONE S-TRANSFERASE L2, CHLOROPLASTIC 2 234 - -
Vvi13g202 237 CDD GST_C_Lambda 112 230 - -
Vvi13g202 237 PANTHER GLUTATHIONE S-TRANSFERASE L1 2 234 IPR044629 GO:0004364
Vvi13g202 237 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 26 107 IPR004045 -
Vvi13g202 237 Gene3D - 105 237 - -
Vvi13g202 237 Pfam Glutathione S-transferase, C-terminal domain 142 207 - -
Vvi13g202 237 Gene3D Glutaredoxin 1 104 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi8g665 Vvi13g202 ECH
Vvi6g350 Vvi13g202 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g202 K00799 - vvi:100267329 484.182