Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi13g202 | ATGGCAACTGGAAGTGTGAGAGAGGTTCTTCCACCAGCTCTTGATTCTACCTCAGAGCCACCCCCACTGTTTGATGGAACAACAAGGCTGTATATATCTTACACTTGCCCATATGCGCAGCGTGTGTGGATTACCCGAAATTGTAAGGGATTGCAGGAGAAGATCAAATTGGTTCCTATTGATTTGCAAAATAGGCCTGCTTGGTACAAGGAGAAAGTCTACCCAGCAAACAAGGTGCCATCTCTGGAACACAATAATGAAGTGAAAGGAGAGAGTCTGGATTTGATCAAATACATTGACAGTAACTTTGAAGGGCCTTCACTGTTCCCTGATGATCCTGCCAAGAGGGAGTTTGCAGAAGAGTTGCTGGCCTACACTGACTCATTCAGTAAAGCTGTGATGACTTTATTGAAGGGTGATGGAGTAGATGAAGCTGGTGCTGCCTTTGATTACATTGAGATGGCTCTCTCCAAATTCGAGGATGGACCTTTTTTCCTTGGCCAGTTCAGTCTGGTAGATATAGCATATGCTCCATTTGTTGAGAGATTTGTGCCGTTCTTACGGGAGGTGAAGAAGTATGATGCGATGGCAGGCAGGCCAAAACTGGAAGCATGGTTTGAGGAGTTGAGCAAGAACGAAGGATTCCAGCAAACTCGGCGTGAGCCAAAGGAGCTTGTTGAAGCCTACAAGAAACGCTTTGCGGCTCACCTCTGA | 714 | 46.22 | MATGSVREVLPPALDSTSEPPPLFDGTTRLYISYTCPYAQRVWITRNCKGLQEKIKLVPIDLQNRPAWYKEKVYPANKVPSLEHNNEVKGESLDLIKYIDSNFEGPSLFPDDPAKREFAEELLAYTDSFSKAVMTLLKGDGVDEAGAAFDYIEMALSKFEDGPFFLGQFSLVDIAYAPFVERFVPFLREVKKYDAMAGRPKLEAWFEELSKNEGFQQTRREPKELVEAYKKRFAAHL* | 238 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 1939188 | 1954420 | - | Vvi13g202 | Vvi13g202 | 773988 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi13g202 | 237 | SFLD | Main (cytGST) | 29 | 211 | - | - | |
Vvi13g202 | 237 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Vvi13g202 | 237 | Pfam | Glutathione S-transferase, N-terminal domain | 30 | 106 | IPR004045 | - | |
Vvi13g202 | 237 | SFLD | Glutathione Transferase (cytosolic) | 29 | 211 | IPR040079 | - | |
Vvi13g202 | 237 | SUPERFAMILY | Thioredoxin-like | 20 | 108 | IPR036249 | - | |
Vvi13g202 | 237 | SUPERFAMILY | GST C-terminal domain-like | 103 | 234 | IPR036282 | - | |
Vvi13g202 | 237 | PANTHER | GLUTATHIONE S-TRANSFERASE L2, CHLOROPLASTIC | 2 | 234 | - | - | |
Vvi13g202 | 237 | CDD | GST_C_Lambda | 112 | 230 | - | - | |
Vvi13g202 | 237 | PANTHER | GLUTATHIONE S-TRANSFERASE L1 | 2 | 234 | IPR044629 | GO:0004364 | |
Vvi13g202 | 237 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 26 | 107 | IPR004045 | - | |
Vvi13g202 | 237 | Gene3D | - | 105 | 237 | - | - | |
Vvi13g202 | 237 | Pfam | Glutathione S-transferase, C-terminal domain | 142 | 207 | - | - | |
Vvi13g202 | 237 | Gene3D | Glutaredoxin | 1 | 104 | - | - |
Event-related genes

Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi13g202 | K00799 | - | vvi:100267329 | 484.182 |