Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g216 ATGACTGTTGGAAAATTTGATTTGCTCTTCTGGGTTTCGTCCATCTTCTGTTTGATGTATGTTTCATTAGGATTTGATCCTACAGACAACTATCTGATAGATTGTGGATCCTCCAAAAATACTTCTGTGGGTAATCGCACTTTTGCGTCTGATAACTCTGATTCCTACACCGTCTCAACCCCAGAACGCCTTTTCGCCAGCACAAACTCTAATACCATCTCTTCCAACTACGATTCATCTCTGTATCAAACTGCTCGAATTCTCAATGAAACAACCCACTACACGTTTTCAATCAAGGCCCCTGGATGGCACTGGATTCGCCTCCATTTCTTTCCGTTTGTTTACCAAGAATTCAATCTGAGCGCCGCGAAATTCTCGGTTTCTGTAAAAAATTTCACTCTCATCAGAGAATACCAGCCCCAGAATGACGCAGAGGTTAAGGAATACTCTTTGAATATATCTTCAGGGCCTCTGGTGCTCACCTTTACCCCTTCTGCCAATTCGTTTGCCTTTGTGAATGCTCTGGAAGTTCTTTCGCTCCCTGATGGCCTCATCCCTGATGGAGCTTCAGTGGTCCACCAGCCTGGCAACTTTGGATTTCGGATTACAGTTATTTGA 618 43.85 MTVGKFDLLFWVSSIFCLMYVSLGFDPTDNYLIDCGSSKNTSVGNRTFASDNSDSYTVSTPERLFASTNSNTISSNYDSSLYQTARILNETTHYTFSIKAPGWHWIRLHFFPFVYQEFNLSAAKFSVSVKNFTLIREYQPQNDAEVKEYSLNISSGPLVLTFTPSANSFAFVNALEVLSLPDGLIPDGASVVHQPGNFGFRITVI* 206
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 2113893 2116038 - Vvi13g216 Vvi13g216 774002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g216 205 PANTHER OS03G0124300 PROTEIN-RELATED 9 196 - -
Vvi13g216 205 Pfam Malectin-like domain 33 185 IPR024788 -
Vvi13g216 205 Gene3D - 30 180 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g368 Vvi13g216 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g216 - - vvi:100265586 401.364