Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g255 ATGGATGCAACAGAGCCAGAACTGTTCTGCAACAAGAAGCAAGCAGTAGAAGCTGTTAACAGCTGGAATATTTCAGGAATTTCAAATATGAATGATTCTCCATGTGGAAACATTTCAAGTTTTGCATCTGTTTCAGGGCCATTCTTGGACCGCCTATTTGGAACTGACCTTAAAATAATTCATCCTCTTAGCAGGAACATTCCATCTGCTAGTACTGGGAATATGGATATGGGAAGAAAGGGATTTGAGTTTCCATTCAGAAGTGATTCCTCGTTTGGTTTATCTATGTCTCATGCTATAGCAGATCCATCTTTCAACTACAGTGGAATCAGAAAAGTTAAAGTGAATGAAGTGAGGGACTCTGACAATGGCATGCCTGTAGGAATGGGGCACTTCTATAATAGGGGAGGTTACAATATGATTTCAGCTGGCTCAGCCTATAATAAGAGTGATTACAGCAACATTTCACTGGGCCCAGTTTATAATAATGGTAATCAGAATACTATTTCAATGGGTGCTTACTTTAATAAGGCAACTTCCAATTTTGGCTCAAGAAGTCATACCTTCAACCAGGAAACTGGCAATTCCATATCAATGGGTCATACCTATCACAAAGTGGATAGGAGTGTGTTGTCCATGGGTCATTTCTATGACAATGGGAATGGAAATTTTTTATCAAAGGTTCAGCAGCATGGAAAGGAAGATGGCAGTATCATGTCAATGAGTCCTGCTTATAACAAGGGGCACGAGAAATTTATTTCAATGGGCCCTTCCTACAGTGAAGCAAATGGTAATTTCGGTACAATGGGTATGGTCTATAGTAAGCACAATGATGATATCATGTCCATGGGTCCAACCAATGATAGGGTGGAGACCGGTAATGTGTCATTGTGTCTCACGACTCTCACCTATGACAACGAAGATTCTAGCATTTTATCTATGGGCCACAACTACAATAAGGGCCAGAACAATACTGTCTCATTTGGAGGCTTTCATGAAGAACCTGAGACAAATTCTTCTGGCAGGATCATTGGCAGCTATGATTTGTTGATGAGTCGGTCATCAGCACAAGCTCCAGAAGCAGTTTGCCAGAAAGATGCTCAAGCTTCAGAAATACTTTGTCAGCAAGATGCACGAGCCTCAGGAGTACTCGGCCAGAAAGATACTCAAGCTTCAGAAATACTTGGCCAGAAAGATGCTCAAACTTCACAAGTACTTACCCAGAAAGATGCTCAATTGTCAGAAATACCTGGCCAGCAAGAAGTACAAACTTCAGAACAAGTACTTAGCCAAAAATATTTGGCTCAATCGAATGCTGATCCAGCTGCTAGTTGCACACCAAAAGCTACTTCTAAAACCGATACTGTCTCAAAAAATAAACAGATAAATACTAAAAAGGATCCCTCAAGCCACTTTCCTTTGAATGTTAAAAGCTTGTTATCAACTGGTATGTTTGATGGGGTTCCTGTGAAGTATGTTTCATGGACACGGGAGAAGAGTGTTCGAGGAGTTATAAAAGGGAGTGGGTATTTGTGCAGCTGTAAGGACTGCAATAGCTCTAATTGTCTTAATGCTTATGAGTTTGAGCGCCATGCTAATTGCAAGACCAAACACCCAAACAATCATATTTACTTCGAGAATGGGAAAACCATTTATGCAGTGGTCCAAGAGCTGAAAAACACTCCTCAAGACAAGCTTTTTGAAGTGATTCAAAATGTAACTGGATGTCCTATTAATCAGAAGAATTTTCAAACTTGGAAAGCATCATATCAGGCGGCAACAGTTGAACTTCAGCGTATCTATGGAAAGGATGGAGCCACAGGACCAATCTTGAAATAA 1839 40.51 MDATEPELFCNKKQAVEAVNSWNISGISNMNDSPCGNISSFASVSGPFLDRLFGTDLKIIHPLSRNIPSASTGNMDMGRKGFEFPFRSDSSFGLSMSHAIADPSFNYSGIRKVKVNEVRDSDNGMPVGMGHFYNRGGYNMISAGSAYNKSDYSNISLGPVYNNGNQNTISMGAYFNKATSNFGSRSHTFNQETGNSISMGHTYHKVDRSVLSMGHFYDNGNGNFLSKVQQHGKEDGSIMSMSPAYNKGHEKFISMGPSYSEANGNFGTMGMVYSKHNDDIMSMGPTNDRVETGNVSLCLTTLTYDNEDSSILSMGHNYNKGQNNTVSFGGFHEEPETNSSGRIIGSYDLLMSRSSAQAPEAVCQKDAQASEILCQQDARASGVLGQKDTQASEILGQKDAQTSQVLTQKDAQLSEIPGQQEVQTSEQVLSQKYLAQSNADPAASCTPKATSKTDTVSKNKQINTKKDPSSHFPLNVKSLLSTGMFDGVPVKYVSWTREKSVRGVIKGSGYLCSCKDCNSSNCLNAYEFERHANCKTKHPNNHIYFENGKTIYAVVQELKNTPQDKLFEVIQNVTGCPINQKNFQTWKASYQAATVELQRIYGKDGATGPILK* 613
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 2508142 2518578 + Vvi13g255 Vvi13g255 774041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g255 612 MobiDBLite consensus disorder prediction 440 469 - -
Vvi13g255 612 Pfam Tify domain binding domain 503 558 IPR032308 -
Vvi13g255 612 PANTHER N-LYSINE METHYLTRANSFERASE 1 607 - -
Vvi13g255 612 MobiDBLite consensus disorder prediction 440 458 - -
Vvi13g255 612 PANTHER AUTOIMMUNE REGULATOR 1 607 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi8g621 Vvi13g255 ECH
Vvi6g395 Vvi13g255 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g255 - - vvi:100249637 1248.42