Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g256 ATGGGCGAGGAGGATTACTCGTTGAGGGTGCAGATTATGCAGGCAATGCCAATTTTGGCGGTGGTTTTGTTGCAGTTTGGCTATGCAGGGTTAAGTATAATTGCAAAGTATGCACTAAACGCAGGGATGAACCACTACACTTTCGTCGTCTACCGCCATGTCATTGCAGCTGCTGTCATTGCTCCTTTTGCTATTGTCTTAGAAAGGAAAAGGTGGCCAAGGATGACTGTCTCCATCTTTGCAAAGATAATGCTGATGGGGTTACTAGAGCCTGTGATTGATCAGAACCTGTATTATGTGGGGATGAAGAACACAACTGCAACTTTTACCACTGCTATGAGCAATATTATTCCTGCATTCACATTTCTAGTAGCTTTGGTCCTCAGGCTAGAGAAGGTGAATCTGAGAAGACTGCATAGCCAGGCAAAGGTGGTGGGGACATTGGTAACAGTGGGGGGAGCTATGCTTATGACACTGGTTAAAGGGCCTGCACCAGACCTGCCATGGACTAAAGGAAGACACTATCATCAATCTTCTACTAGTCAGCAACAACATCCCATTAAAGGTGCCCTCATGATCACAGCAGGCTGTGTATGCTGGGCATGTTTCCTGAATCTACAAGCACGTACGGTGAAGTCATATCCAGCTCAGCTCTCCCTCACCACTTTGATATGTCTGATGGGGGCTCTTGAAGGTGCCATGGTCACCCTTATTATTGAACACGGCAATGCCTCAATCTGGGTTATACCCAAGGGTCCTACACTATGTGCTGTTCTCTATGGTGGGATAGTGTGTTCAGCCATTGCTTATTACATTCAAGGAGTGATAATGGGAGAAAAGGGACCGGTTTTTGTGTCGTCTTTTAATCCTCTGAGCATGATTATTGTTGCCATTCTGAGCTCCTTCATTTTTGCTGAGGCACTCTACTTGGGAATGGTTCTTGGAGCAGTAGTCATTATCATCGGCCTATATCTAATTTTATGGGGTAAGAGCAAGGATCAACCAGAGGGAGTCCGGCTGGTGCCAATTGATCAACAAATGGCTAGAATGAATGGGAATGCAGAGACCTTAAATGGTGATTCTGTTACCAAAGTGACAGTCGAGGAATGTGTTTGA 1116 45.52 MGEEDYSLRVQIMQAMPILAVVLLQFGYAGLSIIAKYALNAGMNHYTFVVYRHVIAAAVIAPFAIVLERKRWPRMTVSIFAKIMLMGLLEPVIDQNLYYVGMKNTTATFTTAMSNIIPAFTFLVALVLRLEKVNLRRLHSQAKVVGTLVTVGGAMLMTLVKGPAPDLPWTKGRHYHQSSTSQQQHPIKGALMITAGCVCWACFLNLQARTVKSYPAQLSLTTLICLMGALEGAMVTLIIEHGNASIWVIPKGPTLCAVLYGGIVCSAIAYYIQGVIMGEKGPVFVSSFNPLSMIIVAILSSFIFAEALYLGMVLGAVVIIIGLYLILWGKSKDQPEGVRLVPIDQQMARMNGNAETLNGDSVTKVTVEECV* 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 2519392 2521518 - Vvi13g256 Vvi13g256 774042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g256 371 Pfam EamA-like transporter family 188 327 IPR000620 GO:0016020|GO:0016021
Vvi13g256 371 Pfam EamA-like transporter family 17 157 IPR000620 GO:0016020|GO:0016021
Vvi13g256 371 PANTHER WAT1-RELATED PROTEIN 14 336 - -
Vvi13g256 371 PANTHER WAT1-RELATED PROTEIN 14 336 IPR030184 GO:0016021|GO:0022857
Vvi13g256 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 238 332 - -
Vvi13g256 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 160 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi8g620 Vvi13g256 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g256 - - vvi:100247871 712.22