Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g34 ATGAAGGGTAATCTCCACAAAAAAATGCATTCCCTCACCATGAGTTTCGGTAATTCTTCCATCATCAAGGACCACTTGCTGCTCGACATCGACCGCTTGATCCGCTTCAACATGGACTCATGGACCAGCCGGATCTTACTTATGGAAGAGGCCAAGAAGATAACATTCGATTTGACAGTGAAGCAGCTGATGAGCTTTGATCCAGGGGAGTGGACTGAGTCTCTGAGAAAAGAATATGTGCTTGTGATTGAAGGCTTCTTTACCGTCCCTTTCCCTCTCTTCTCCGCCACCTACCGCAGAGCCATCCAAGCAAGGACGAAGGTAGCAGAGGCACTGAACTTGGTAGTGAGGGAAAGGAGGAAAGCCAAGGAAGAAGGAGAAGAGGAGAAGAAGAACGACATGCTGGCCGCCCTCCTCGACAGCGGCGATAACTTCTCCGACGAGCAGATCGTGGATTTCATCCTGGCCCTGCTGGTGGCTGGCTACGAGACCACCTCCACCATCATGACCCTCGCGATCAAGTTCCTCACAGAGACCCCTCTCGCCTTGGCTCAGCTCAGGGAGGAGCATGACGAGATTAGGGCAAGGATAAGTGACCCTAATGTTCTGGAATGGAGTGATTATAAATCCATGCCTTTCACTCAATGTGTTGTGAATGAGACTTTGAGGGTGGCAAACATAATAGGTGGGATTTTCAGGCGAGTAACCACTGACATCCATGTCAAAGGTTACACAATTCCTAAGGGATGGAAGGTGTTTGCATCATTTCGAGCTGTACACCTGGACCATGAATACTTCAAGGATGCTCGTACTTTTAATCCCTGGAGATGGCAGAATAATTCTGGACCCACGGTTCCAGGGAGTGGTGTGAATGTGTTCACACCATTTGGAGGAGGGCCGCGCCTGTGCCCTGGCTATGAGCTTGCAAGGGTGGTGCTCTCGGTTTTCCTTCACCGCATGGTCACTCGATACAGCTGGGCTCCTGCAGAGGAGGATAAGTTGGTGTTCTTTCCAACCACTAGGACTCAGAAGCGATACCCCATCAATGTGGAGAGGCGAAAAGTGTCATCCGCCGCAGAAAAAGGTGAGGGATGA 1095 50.5 MKGNLHKKMHSLTMSFGNSSIIKDHLLLDIDRLIRFNMDSWTSRILLMEEAKKITFDLTVKQLMSFDPGEWTESLRKEYVLVIEGFFTVPFPLFSATYRRAIQARTKVAEALNLVVRERRKAKEEGEEEKKNDMLAALLDSGDNFSDEQIVDFILALLVAGYETTSTIMTLAIKFLTETPLALAQLREEHDEIRARISDPNVLEWSDYKSMPFTQCVVNETLRVANIIGGIFRRVTTDIHVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQNNSGPTVPGSGVNVFTPFGGGPRLCPGYELARVVLSVFLHRMVTRYSWAPAEEDKLVFFPTTRTQKRYPINVERRKVSSAAEKGEG* 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 360152 364048 + Vvi13g34 Vvi13g34 773820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g34 364 SUPERFAMILY Cytochrome P450 2 353 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g34 364 Pfam Cytochrome P450 89 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g34 364 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 296 305 IPR017972 GO:0005506|GO:0016705
Vvi13g34 364 Gene3D Cytochrome P450 1 354 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g34 364 PRINTS P450 superfamily signature 160 177 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g34 364 PRINTS P450 superfamily signature 216 227 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g34 364 PRINTS P450 superfamily signature 294 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g34 364 PRINTS P450 superfamily signature 303 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g34 364 PANTHER CYTOCHROME P450 26 1 352 - -
Vvi13g34 364 PANTHER CYTOCHROME P450 90A1 1 352 - -
Vvi13g34 364 PRINTS E-class P450 group I signature 149 166 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g34 364 PRINTS E-class P450 group I signature 169 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g34 364 PRINTS E-class P450 group I signature 215 233 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g34 364 PRINTS E-class P450 group I signature 255 279 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g34 364 PRINTS E-class P450 group I signature 293 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g34 364 PRINTS E-class P450 group I signature 303 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g34 K09588 - vvi:100258692 694.115