Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi13g356 | ATGGTCTCCACTGAAGAGATTCTTCTTGAAAGACCTAGAGCTCCGGGTACCAAAGCAGAAGAAACCAAGATTGCTGGAGACTCCTTGGCTCAGCTTGGAAAGGGAGGTGCTGTTCTCATGGTGTGCAGAACTTGTGGTAAGAAAGGTGACCATTGGACATCTAGATGCCCATACAAGGATCTCGCAGCACAAACTGATGCCTTCGTTGACAAACCTCCCGCTGCCGAGACCACTGTGGCTACTACAGGCACTGGCAAAGCCGCTTATGTGCCTCCAGGCATGAGACCTGGTGCAGAGAGAGTTGGATCAGATATGAGGCGCAGGAATGAAGAGAATTCAGTTCGGGTCACCAACCTATCAGAGGACACAAGGGAGCCTGACTTGCATGAGCTATTCCGCACATTTGGCCCAGTAAGTCGGGTCTACGTGGCGATTGACCAAAAGACCGGCATGAGCAGAGGTTTTGGTTTTGTCAATTTTGTAAACAAGGAAGATGCAGAGAGGGCTATCAACAAGCTGAATGGGTATGGTTATGACAATCTCATCCTCAGAGTGGAATGGGCCACACCCAGGACAAACTAG | 582 | 50.0 | MVSTEEILLERPRAPGTKAEETKIAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAAQTDAFVDKPPAAETTVATTGTGKAAYVPPGMRPGAERVGSDMRRRNEENSVRVTNLSEDTREPDLHELFRTFGPVSRVYVAIDQKTGMSRGFGFVNFVNKEDAERAINKLNGYGYDNLILRVEWATPRTN* | 194 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 3574679 | 3578959 | - | Vvi13g356 | Vvi13g356 | 774142 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi13g356 | 193 | SMART | rrm1_1 | 113 | 186 | IPR000504 | GO:0003723 | |
Vvi13g356 | 193 | Pfam | Eukaryotic translation initiation factor 3 subunit G | 2 | 61 | IPR024675 | - | |
Vvi13g356 | 193 | Gene3D | - | 85 | 193 | IPR012677 | - | |
Vvi13g356 | 193 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G | 1 | 193 | - | - | |
Vvi13g356 | 193 | SUPERFAMILY | RNA-binding domain, RBD | 110 | 192 | IPR035979 | GO:0003676 | |
Vvi13g356 | 193 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 112 | 190 | IPR000504 | GO:0003723 | |
Vvi13g356 | 193 | CDD | RRM_eIF3G_like | 113 | 188 | IPR034240 | - | |
Vvi13g356 | 193 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G | 1 | 193 | - | - | |
Vvi13g356 | 193 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 114 | 180 | IPR000504 | GO:0003723 |
Event-related genes

Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi13g356 | K03248 | - | vvi:100251333 | 380.948 |