Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g369 ATGGGAGACAAGCCTTCTGGGGATATCTCAGCGGTTACTGCTCACACCAACATGCTGCAACAAGTCTTCGGCAGCAATATTGCATCGGATTCTCTACTCTACAGCTACAAAAGAAGTTTCAATGGATTTGTAGTGAAGCTAACAGAGGAGGAAATGAAGGAATTGGAGGGAATGGATGGTGTGGTCTCCATTTTCCCTAATGAGAAGAAAAAGCTCCACACAACAAGGTCATGGGATTTCATTGGGTTTCCCCAACAAGTTAACAGAACAAGTGTTGAAAGCGATGTTATCATCGCAGTACTTGACACCGGAATATGGCCGGAGTCTGACAGCTTCAAAGATAAAGGATTTGGTCCACCGCCTAGCAAATGGAAGGGCATTTGCCAGGGCTTATCCAATTTCACTTGCAACAATAAAATCATCGGGGCTAGGTACTATCGGAGCTATGGAGAATTTAGCCCAGAAGATTTGCAAACCCCAAGAGATTCAGAAGGCCATGGGACACACACTGCATCCACTGCAGCTGGGGGCCTAGTTAGCATGGCAAGCCTGTTGGGCTTTGGCTTAGGGACTGCTCGGGGTGGGGTTCCATCAGCTCGTATAGCTGTGTATAAGATATGTTGGTCTGATGGCTGTGCTGATGCTGATATCCTTGCAGCCTTTGACGATGCAATTGCTGATGGGGTTGACATAATCTCTCTTTCAGTTGGGGGTTCCACTCCCAAGAATTATTTTGCAGATTCAATTGCAATTGGAGCTTTTCATGCAATGAAAAATGGGATACTAACATCAACTTCTGCTGGTAACGACGGACCCAACTTTGCTTCCATCACAAATTTCTCGCCATGGTCTCTTTCTGTGGCTGCTAGCACCATAGACCGGAAGTTTTTTACCAAGGTGCAACTAGGTGACAGTAAGGTTTATGAGGGAATTTCAATAAACACATTTGAGCCCAATGGCATGTATCCTTTTATTTATGGTGGGGACGCACCGAATATTACAGGAGGTTTTAGTGCCAACACATCCAGGTTTTGCACTAGGAACTCGTTGGACCCCAATTTAGTCAAGGGTAAAATTGTTCTTTGCGACATATTTAGCAACGGGACAGGTGCATTCTTGGCAGGTGCAGTTGGGACGGTGATGGCGGATAGAGGAGCCAAAGATTCTGCCTGGCCTTTTCCTTTGCCTGCATCTTACCTTGGCGCACAGGATGGTAGCAGTATTGCCTACTATGTAACATCAACAAGTAACCCAACGGCATCCATATTGAAGAGCACTGAGGTCAATGACACATTGGCTCCATTTATAGTCTCCTTCTCATCAAGGGGTCCAAACCCAGCTACACTAGACATTCTCAAGCCGGATTTAGCTGCCCCCGGAGTCCATATTCTGGCTGCATGGCCACCAATTTCTCCAATTTCTGGGGTACAAGGTGATACTCGAGCAGTGCTGTACACTATGCAATCTGGCACATCTATGGCTTGCCCACATGCTACTGGAGCAGCAGCCTACATCAAGTCATTTCATCCCACCTGGTCTCCTGCTGCTATTAAGTCTGCTCTTATGACTACTGCTCTTCCCATGAGCGCTGAAAAAAATCCGGATGCAGAATTCGCATATGGCGCAGGCCAGATAGATCCTTTAAAGTCTGTAAACCCTGGTTTGGTATATGATGCTGATAAGATTGACTATGTAAAATTTTTGTGTGGGCAAGGTTATACTACCCAGACCCTACAACTCGTTACTGGGGATAACAGCGTCTGCTCTGAAGCCACAAATGGAACTGTCTGGGATCTAAATTACCCTTCCTTTGCTCTCTCCAGCTCCACCTTTGAATCTATAACTGGTGTGTTCACCAGGACTGTCACAAATGTTGGGTCGCCCGTATCCACATATAAAGCTACTGTGACGGGTGCCCCAATTGGACTTCAAATCCAAGTTGTTCCAGACATTTTATCATTCACATCGCTCGGGCAGAAGCTGTCCTTTGTGTTGAAGGTTGAAGGAAAGGTAGGTGACAACATAGTCTCTGCTTCTTTGGTGTGGGATGATGGTGTACATCAAGTGAGGAGCCCCATTGTTGTGAGTATATTGTGTACATGGGGGACCTTCCAAAGGGTGATGTGTCGGCTTCAGCCCTTCATATTAACATGCTACATCAAGTGTTTGACAGCCATGGACGGGGTAGTGACTGTATTCCCAAATGGAAAGAAGAAACTCCTCACAACAAGATCATGGGACTTCATGGGCTTTCCCCAAGAAGTTAAAAGAACGGCAACTGAAAGCGATATTATCATTGGAATGCTTGATTCTGGGATCTGGCCTCTAGTTTCAGTGATGAAGGATTCGGTCCTCCACCAAGCAAATGGAAGGGTACTTGTCAAACCTCATCCAATTTCACTGGCAACAATAAAATCATTGGAGCTAAATACTACAGAAGGACAGCTAGAGGAGGGCTTCCCTCTGCTCGCATCGCAGTGTACAAGATATGTTTGTCAGATGGTTGTCAAGTTGGGAAACAACAAGGTTTATGAGGGAGTCTCTATAAATACTTTTGAGATGAAGGGTATGTACCCTATCATTTATGGTGGAGATGCCACAAATACTACAGGAGGTTATAATAGTTCTTCTTCCAGTCTGGTAAATGGTAAAATCCTATTCTGTGATTCGGACACTGATGGGTGGGAGCAGCGGATACTGTATTTCAAGATGAATGCTACAATGATTTTTCCACCAATTGTTGAGGTTGAAGACAAATTGGCCCCATTTGTAGCTTCATTTTCCTCGAGGGGCCCCAACCCTGTTACAAGTGACATTCTCAAGCCTGACTTAACTGCACCGGGAGTGGACATTGTAGCAGCATGGACAAAGGCTTCAACTGTAACAGGATATGATTGGGACACAAGAGTAGTCCCATACAATATAGTTTCCGGGCCATCCATGGCTTGTCCAAATGCTTCTGGGGCTGCTGCCTATGTCAAATCATTTCACCCAACATAG 3000 45.57 MGDKPSGDISAVTAHTNMLQQVFGSNIASDSLLYSYKRSFNGFVVKLTEEEMKELEGMDGVVSIFPNEKKKLHTTRSWDFIGFPQQVNRTSVESDVIIAVLDTGIWPESDSFKDKGFGPPPSKWKGICQGLSNFTCNNKIIGARYYRSYGEFSPEDLQTPRDSEGHGTHTASTAAGGLVSMASLLGFGLGTARGGVPSARIAVYKICWSDGCADADILAAFDDAIADGVDIISLSVGGSTPKNYFADSIAIGAFHAMKNGILTSTSAGNDGPNFASITNFSPWSLSVAASTIDRKFFTKVQLGDSKVYEGISINTFEPNGMYPFIYGGDAPNITGGFSANTSRFCTRNSLDPNLVKGKIVLCDIFSNGTGAFLAGAVGTVMADRGAKDSAWPFPLPASYLGAQDGSSIAYYVTSTSNPTASILKSTEVNDTLAPFIVSFSSRGPNPATLDILKPDLAAPGVHILAAWPPISPISGVQGDTRAVLYTMQSGTSMACPHATGAAAYIKSFHPTWSPAAIKSALMTTALPMSAEKNPDAEFAYGAGQIDPLKSVNPGLVYDADKIDYVKFLCGQGYTTQTLQLVTGDNSVCSEATNGTVWDLNYPSFALSSSTFESITGVFTRTVTNVGSPVSTYKATVTGAPIGLQIQVVPDILSFTSLGQKLSFVLKVEGKVGDNIVSASLVWDDGVHQVRSPIVVSILCTWGTFQRVMCRLQPFILTCYIKCLTAMDGVVTVFPNGKKKLLTTRSWDFMGFPQEVKRTATESDIIIGMLDSGIWPLVSVMKDSVLHQANGRVLVKPHPISLATIKSLELNTTEGQLEEGFPLLASQCTRYVCQMVVKLGNNKVYEGVSINTFEMKGMYPIIYGGDATNTTGGYNSSSSSLVNGKILFCDSDTDGWEQRILYFKMNATMIFPPIVEVEDKLAPFVASFSSRGPNPVTSDILKPDLTAPGVDIVAAWTKASTVTGYDWDTRVVPYNIVSGPSMACPNASGAAAYVKSFHPT* 1000
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 3719036 3728106 + Vvi13g369 Vvi13g369 774155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g369 999 Gene3D - 568 698 - -
Vvi13g369 999 PANTHER PUTATIVE-RELATED 1 697 - -
Vvi13g369 999 PANTHER PUTATIVE-RELATED 723 782 - -
Vvi13g369 999 PANTHER PUTATIVE-RELATED 912 999 - -
Vvi13g369 999 PANTHER PUTATIVE-RELATED 831 894 - -
Vvi13g369 999 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 831 894 IPR045051 -
Vvi13g369 999 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 697 IPR045051 -
Vvi13g369 999 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 723 782 IPR045051 -
Vvi13g369 999 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 912 999 IPR045051 -
Vvi13g369 999 CDD Peptidases_S8_3 70 525 IPR034197 -
Vvi13g369 999 Gene3D Peptidase S8/S53 domain 917 999 IPR036852 GO:0004252|GO:0006508
Vvi13g369 999 Pfam Fibronectin type-III domain 598 695 IPR041469 -
Vvi13g369 999 SUPERFAMILY Subtilisin-like 921 999 IPR036852 GO:0004252|GO:0006508
Vvi13g369 999 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 73 IPR037045 -
Vvi13g369 999 ProSitePatterns Serine proteases, subtilase family, serine active site. 490 500 IPR023828 -
Vvi13g369 999 Gene3D Peptidase S8/S53 domain 95 564 IPR036852 GO:0004252|GO:0006508
Vvi13g369 999 SUPERFAMILY Subtilisin-like 72 555 IPR036852 GO:0004252|GO:0006508
Vvi13g369 999 PRINTS Subtilisin serine protease family (S8) signature 93 112 IPR015500 -
Vvi13g369 999 PRINTS Subtilisin serine protease family (S8) signature 162 175 IPR015500 -
Vvi13g369 999 PRINTS Subtilisin serine protease family (S8) signature 489 505 IPR015500 -
Vvi13g369 999 Gene3D - 832 916 - -
Vvi13g369 999 Gene3D - 293 429 - -
Vvi13g369 999 SUPERFAMILY Subtilisin-like 740 999 IPR036852 GO:0004252|GO:0006508
Vvi13g369 999 Pfam Subtilase family 94 543 IPR000209 GO:0006508|GO:0008236
Vvi13g369 999 Pfam Subtilase family 924 998 IPR000209 GO:0006508|GO:0008236
Vvi13g369 999 CDD PA_subtilisin_like 300 422 - -
Vvi13g369 999 Pfam Peptidase inhibitor I9 10 73 IPR010259 -
Vvi13g369 999 ProSiteProfiles Serine proteases, subtilase domain profile. 77 551 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g369 - - vvi:100244497 1380.93