Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g370 ATGTGCATAGCTTACCTTCTAATGGCAAGAAAGAACTCTTTCCTCTGGCTTCTCCTTCTCAGTCTCATCTGTACTCTGGTCTGTACCCACAGTACTGCAGCAGCTTCGAAGGATGATGGTCGAAAGGAGTACATTGTGTACATGGGTGCCAAGCCTGCCGGAGATTTCTCGGCATCTGCCATTCACATCGACATGCTGCAGCAAGTCTTTGGCAGCAGTAGGGCATCAATTTCTCTGGTCCGCAGTTACAAAAGGAGTTTCAATGGATTTGTAGCGAAGCTCACAGAGGAGGAAATGCAGCAAATGAAGGGAATGGACGGGGTAGTCTCGATTTTTCCTAACGAAAAGAAACAGCTCCACACAACGAGGTCATGGGATTTCGTGGGGTTTCCCCAGCAAGTTAAAAGAACTAGTATTGAAAGTGACATAATAATAGGAGTGTTAGACAGTGGAATATGGCCAGAGTCTGACAGCTTCGATGATGAAGGATTTGGTCCACCGCCTAGCAAATGGATAGGGACTTGCCAAGGCTTTTCCAATTTTACTTGCAACAATAAAATTATTGGAGCCAAGTACTATCGGAGCAGTGGACAATTTAGGCAAGAAGATTTTCAATCCCCAAGAGATTCAGAAGGCCACGGGACACACACTGCATCCACTGCAGCTGGGGGCCTAGTTAGCATGGCAAGTCTCATGGGCTTTGGCTTAGGGACTGCTCGGGGCGGGGTTCCATCAGCTCGGATAGCTGTGTATAAGATATGTTGGTCTGATGGCTGTTTTGGTGCTGATATTCTCGCAGCATTTGATGATGCAATTGCTGATGGGGTTGATATAATCTCCATTTCAGTAGGGGGTAAAACTCCCACAAATTATTTTGAAGATCCAATTGCCATTGGAGCTTTTCACGCAATGAAAAAACGGATACTAACATCAGCTTCTGCTGGTAACGATGGACCTGTTCTTGCTTCCATCACAAATTTCTCGCCTTGGTCTCTTTCCGTGGCTGCTAGCACCATAGACCGGGATTTCTTCACCAAGGTGCAACTAGGCGACAGTAACGTTTTTGAGGGAGTTTCAATAAACACATTTGAGCTCAATGACATGTATCCTTTGATTTACGGTGGAGATGCCCCGAATACTGCAGCAGGTTTTAGTGGGAACAGATCTAGGTTTTGCTTTCCAAGCACATTGAACCCAAATTTAGTTAAAGGTAAAATTGTCCTTTGTGATGTGAAGACCAATGGGGCTGGCGCATTCTTGGCGGGTGCTGTTGGGGCTCTGATGGCAGATACACTCCCCAAAGATTCCAGCCGCAGTTTTCCCTTGCCTGCATCTCACCTTAGCGCACGAGATGGAAGCAGTATTGCCAACTACATCAACTCAACAAGTAACCCAACTGCATCAATATTCAAGAGTACTGAGGTTAGTGACGCATTGGCCCCATACGTAGTCTCCTTCTCATCAAGGGGTCCAAACCCAGCTTCATTCGACCTTCTCAAGCCTGACATAGCAGCCCCAGGAGTCCGCATTCTAGCTGCCTGGCCACCAATTGCTCCAGTTTCTGGAGTAAAAGGTGATAATCGAGAAGTGCTATACAATATAATTTCCGGGACGTCAATGTCCTGCCCACATGCTTCCGGGGCAGCTGCCTACATCAAGTCATTTAACCCCACCTGGTCTCCTGCTGCCATTAAGTCTGCTCTTATGACTACTGCTACTCCCATGAGTGCTAAAAAAAATCCGGAAGCCGAATTTGCATATGGTGCGGGCAATATAGATCCTGTAAAGGCTATAGATCCTGGTCTGGTATATGACGCCGATGAGATTGACTATGTAAAATTTTTTGTCTGTTCTGCAGCTACAAATGGAACCGTCTGGAATCTAAATTACCCTTCCTTTGCTCTTTCCAGCCTCACCAAGGAATCCATCACTGGCATGTTCAATAGGACTGTCACAAACGTTGGATCATCGGTGTCCACGTATAAAGCAACTGTTATAGGTGCTCCAGAGGGACTCGAAATCCAAGTTGAACCAAGCATTTTATCATTCACATCCCTCATGCAGAAGCTATCCTTTGTGTTGAAGGTTGAAGGAAAGGTAGAGAGAGAGAGGAGATTGGAAGGCTCCAGTATATATATGTATGCATGTCCAAGCACCACGAAGCCCATAGCTTACCATCATCTAATGGCAAGACAAAAAAACTCTTCTCTGTGGTTTCTCCTTCTCAGTCTCATCTGCAGTCTGCTCAGCACCCACAGTACTGCAGCAGCTTCCGAGGATGATGTTCGAAAGGAGTATATTGTGTACATGGGTGCCAAGCCTGCCGGAGATTTCTCGGCGTCTGTCATTCACACCAACATGCTGGAGCAAGTCTTTGGCAGCGATAGGGCATCAAGTTCTTTAGTCCGCAGTTACAAAAGGAGTTTCAATGGATTTGTAGCAAAGCTAACAGAGGATGAAATGCAGCAAATGAAAGGCATGGACGGGGTGGTCTCGGTTTTCCCTAGCGAAAAGAAACAGCTCCACACAACTCGGTCGTGGGATTTCGTGGGGTTTCCCCGACAAGTTAAAAGAACAAGTGTTGAAAGCGACATTATCATAGGAGTGCTTGACGGTGGAATATGGCCCGAGTCTGACAGCTTCGATGATAAAGGATTTGGCCCACCGCCAAGGAAATGGAAGGGCACTTGCCAAGGGTTTTCCAATTTCACTTGCAACAATAAAATTATTGGAGCCAAGTACTATAAGAGTGATAGAAAATTTAGCCCAGAAGATTTGCAATCCCCAAGAGATTCAGACGGCCACGGGACACACACTGCATCCACTGCAGCTGGGGGCCTAGTCAACATGGCAAGTCTCATGGGCTTTGGCTTAGGGACTGCTCGGGGCGGAGTTCCATCAGCTCGGATAGCAGTGTATAAGATATGTTGGTCTGATGGCTGTGATGATGCTGATATTCTCGCAGCATTTGATGATGCAATTGCTGATGGGGTTGATATAATCTCTTATTCACTTGGGAATCCCCCTTCCCAGGATTATTTTAAAGATACTGCTGCAATCGGTGCTTTTCATGCAATGAAAAATGGGATACTAACATCAACTTCTGCTGGTAACGATGGACCTCGCCTTGTTTCCGTCGTAAGTGTCTCGCCATGGTCTCTTTCCGTGGCTGCTAGCACCATAGATCGGAAGTTCTTGACCGAGGTGCAACTAGGTGACAGGAAGGTTTATAAGGGATTTTCGATAAACGCATTTGAGCCCAATGGCATGTATCCTTTGATTTATGGTGGGGATGCCCCGAATACTAGAGGAGGTTTTAGAGGGAACACATCCAGGTTTTGCGAAAAAAACTCATTGAACCCAAATTTAGTGAAGGGTAAAATTGTCCTTTGCATTGGGCTTGGCGCTGGGCTTGAAGAAACATCGAATGCATTCTTGGCAGGTGCCGTTGGGACTGTGATAGTGGATGGACTCCGATTCCCCAAAGATTCCAGCTATATTTATCCCTTGCCTGCATCTCGCCTTGGTGCAGGAGATGGTAAAAGAATTGCCTACTACATCAGCTCAACAAGTAACCCAACTGCATCGATTTTGAAGAGTATTGAGGTTAAGGACACATTGGCCCCATATGTACCCTCCTTCTCATCAAGGGGTCCAAACAATATTACACACGACCTTCTCAAGCCAGATTTAACAGCCCCAGGTGTACACATTCTGGCTGCCTGGTCACCAATTTCTCCAATCTCTCAAATGAGTGGTGATAATCGAGTAGCGCAATACAATATATTAAGCGGCACGTCAATGGCTTGTCCACATGCTACTGGGGCAGCTGCCTACATCAAGTCATTTCACCCCACCTGGTCTCCTGCTGCTATTAAGTCTGCTCTTATGACTACTGCTACTCCCATGAGCGCTAGAAAAAATCCGGAAGCCGAATTTGCATATGGTGCAGGCAATATTGATCCTGTAAGGGCTGTGCACCCTGGTTTAGTGTATGATGCCGATGAGATTGACTTTGTAAATTTTTTGTGTGGAGAAGGCTATAGTTTTCAGACTCTACGGAAAGTCACCGGGGATCATAGTGCCTGTTCGAAAGCTACGAATGGAGCCGTTTGGGATCTAAATTACCCTTCTTTTGCGCTTTCCACCTCCAACAAAGAATCCATCGCTCGCACATTCCACAGGAGTGTCACAAACGTTGGATCACCGATGTCTACATATAAAGCAATTGTTATAGGTGCCCCAAAGGGACTCAAAATCAACGTTAAACCAAACATTTTATCATTCACATCCATCGGGCAGAAACTTTCTTTTGTGTTGAAGGTTAATGGACGGATGGTTGAAGACATAGTCTCTGCTTCGTTAGTGTGGGATGACGGTTTACATAAAGTGAGGTCCCCCATTATTGTGTATGCAGTCCAATAA 4425 46.06 MCIAYLLMARKNSFLWLLLLSLICTLVCTHSTAAASKDDGRKEYIVYMGAKPAGDFSASAIHIDMLQQVFGSSRASISLVRSYKRSFNGFVAKLTEEEMQQMKGMDGVVSIFPNEKKQLHTTRSWDFVGFPQQVKRTSIESDIIIGVLDSGIWPESDSFDDEGFGPPPSKWIGTCQGFSNFTCNNKIIGAKYYRSSGQFRQEDFQSPRDSEGHGTHTASTAAGGLVSMASLMGFGLGTARGGVPSARIAVYKICWSDGCFGADILAAFDDAIADGVDIISISVGGKTPTNYFEDPIAIGAFHAMKKRILTSASAGNDGPVLASITNFSPWSLSVAASTIDRDFFTKVQLGDSNVFEGVSINTFELNDMYPLIYGGDAPNTAAGFSGNRSRFCFPSTLNPNLVKGKIVLCDVKTNGAGAFLAGAVGALMADTLPKDSSRSFPLPASHLSARDGSSIANYINSTSNPTASIFKSTEVSDALAPYVVSFSSRGPNPASFDLLKPDIAAPGVRILAAWPPIAPVSGVKGDNREVLYNIISGTSMSCPHASGAAAYIKSFNPTWSPAAIKSALMTTATPMSAKKNPEAEFAYGAGNIDPVKAIDPGLVYDADEIDYVKFFVCSAATNGTVWNLNYPSFALSSLTKESITGMFNRTVTNVGSSVSTYKATVIGAPEGLEIQVEPSILSFTSLMQKLSFVLKVEGKVERERRLEGSSIYMYACPSTTKPIAYHHLMARQKNSSLWFLLLSLICSLLSTHSTAAASEDDVRKEYIVYMGAKPAGDFSASVIHTNMLEQVFGSDRASSSLVRSYKRSFNGFVAKLTEDEMQQMKGMDGVVSVFPSEKKQLHTTRSWDFVGFPRQVKRTSVESDIIIGVLDGGIWPESDSFDDKGFGPPPRKWKGTCQGFSNFTCNNKIIGAKYYKSDRKFSPEDLQSPRDSDGHGTHTASTAAGGLVNMASLMGFGLGTARGGVPSARIAVYKICWSDGCDDADILAAFDDAIADGVDIISYSLGNPPSQDYFKDTAAIGAFHAMKNGILTSTSAGNDGPRLVSVVSVSPWSLSVAASTIDRKFLTEVQLGDRKVYKGFSINAFEPNGMYPLIYGGDAPNTRGGFRGNTSRFCEKNSLNPNLVKGKIVLCIGLGAGLEETSNAFLAGAVGTVIVDGLRFPKDSSYIYPLPASRLGAGDGKRIAYYISSTSNPTASILKSIEVKDTLAPYVPSFSSRGPNNITHDLLKPDLTAPGVHILAAWSPISPISQMSGDNRVAQYNILSGTSMACPHATGAAAYIKSFHPTWSPAAIKSALMTTATPMSARKNPEAEFAYGAGNIDPVRAVHPGLVYDADEIDFVNFLCGEGYSFQTLRKVTGDHSACSKATNGAVWDLNYPSFALSTSNKESIARTFHRSVTNVGSPMSTYKAIVIGAPKGLKINVKPNILSFTSIGQKLSFVLKVNGRMVEDIVSASLVWDDGLHKVRSPIIVYAVQ* 1475
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 3740285 3750179 + Vvi13g370 Vvi13g370 774156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g370 1474 Pfam Fibronectin type-III domain 1373 1470 IPR041469 -
Vvi13g370 1474 Pfam Fibronectin type-III domain 627 709 IPR041469 -
Vvi13g370 1474 SUPERFAMILY Subtilisin-like 851 1327 IPR036852 GO:0004252|GO:0006508
Vvi13g370 1474 CDD PA_subtilisin_like 347 469 - -
Vvi13g370 1474 PANTHER PUTATIVE-RELATED 754 1471 - -
Vvi13g370 1474 PANTHER PUTATIVE-RELATED 32 712 - -
Vvi13g370 1474 Gene3D Peptidase S8/S53 domain 864 1339 IPR036852 GO:0004252|GO:0006508
Vvi13g370 1474 Gene3D Peptidase S8/S53 domain 142 607 IPR036852 GO:0004252|GO:0006508
Vvi13g370 1474 ProSitePatterns Serine proteases, subtilase family, serine active site. 537 547 IPR023828 -
Vvi13g370 1474 ProSitePatterns Serine proteases, subtilase family, serine active site. 1265 1275 IPR023828 -
Vvi13g370 1474 Pfam Peptidase inhibitor I9 766 842 IPR010259 -
Vvi13g370 1474 Pfam Peptidase inhibitor I9 44 120 IPR010259 -
Vvi13g370 1474 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 712 IPR045051 -
Vvi13g370 1474 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 754 1471 IPR045051 -
Vvi13g370 1474 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 749 842 IPR037045 -
Vvi13g370 1474 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 27 120 IPR037045 -
Vvi13g370 1474 Pfam Subtilase family 141 590 IPR000209 GO:0006508|GO:0008236
Vvi13g370 1474 Pfam Subtilase family 863 1318 IPR000209 GO:0006508|GO:0008236
Vvi13g370 1474 Gene3D - 1343 1473 - -
Vvi13g370 1474 Gene3D - 608 726 - -
Vvi13g370 1474 CDD Peptidases_S8_3 117 573 IPR034197 -
Vvi13g370 1474 CDD Peptidases_S8_3 839 1301 IPR034197 -
Vvi13g370 1474 ProSiteProfiles Serine proteases, subtilase domain profile. 846 1326 - -
Vvi13g370 1474 ProSiteProfiles Serine proteases, subtilase domain profile. 124 598 - -
Vvi13g370 1474 SUPERFAMILY Subtilisin-like 119 602 IPR036852 GO:0004252|GO:0006508
Vvi13g370 1474 Gene3D - 340 476 - -
Vvi13g370 1474 Gene3D - 1062 1204 - -
Vvi13g370 1474 Pfam PA domain 370 454 IPR003137 -
Vvi13g370 1474 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Vvi13g370 1474 PRINTS Subtilisin serine protease family (S8) signature 209 222 IPR015500 -
Vvi13g370 1474 PRINTS Subtilisin serine protease family (S8) signature 536 552 IPR015500 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g370 - - gra:105775705 1577.76