Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g373 ATGGCAAGACAAAAAAACTCTTCTCTGTGGTTTCTCCTTCTCAGTCTCATCTGCAGTCTGCTCAGTACCCACAGTACTGCAGCAGCTTCCGAGGATGATGTTCGAAAGGAGTATATTGTGTACATGGGTGCCAAGCCTGCCGGAGATTTCTCGGCGTCTGCCATTCACACCAACATGCTGGAGCAAGTCTTTGGCAGCGGTAGGGCATCAAGTTCTTTAGTCCGCAGTTACAAAAGGAGTTTCAATGGATTTGTAGCAAAGCTAACAGAGGATGAAATGCAGCAAATGAAAGGCATGGACGGGGTGGTCTCGGTTTTCCCTAGCGAAAAGAAACAGCTCCACACAACTAGGTCGTGGGATTTCGTGGGGTTTCCCCGACAAGTTAAAAGAACAAGTTTTGAAAGCGACATTATCATAGGAGTGCTTGACGGTGGAATATGGCCAGAGTCTGACAGCTTCGATGATAAAGGATTTGGCCCACCGCCAAGGAAATGGAAGGGCACTTGCCAAGGGTTTTCCAATTTCACTTGCAACAATAAAATTATTGGAGCCAAGTACTATAAGAGCGATAGAAAATTTAGCCCAGAAGATTTGCAATCCCCAAGAGATTCAGACGGCCACGGGACACACACTGCATCCACTGCAGCTGGGGGCCTAGTCAACATGGCAAGTCTCATGGGCTTTGGCTTAGGAACTGCTCGGGGCGGAGTTCCATCAGCTCGGATAGCAGTGTATAAGATATGTTGGTCTGATGGCTGTGATGATGCTGATATTCTCGCAGCATTTGATGATGCAATTGCTGATGGGGTTGATATAATCTCTTATTCACTTGGGAATCCCCCTTCCCGGGATTATTTTAAAGATACTGCTGCAATCGGTGCTTTTCATGCAATGAAAAATGGGATACTAACATCAACTTCTGCTGGTAACGATGGACCTCGCCTTGTTTCCGTCGTAAATGTCGCGCCATGGTCTCTTTCCGTGGCTGCTAGCACCATAGATCGGAAGTTCTTGACCGAGGTGCAACTAGGTGACAAGAAGGTTTATAAGGGATTTTCGATAAACGCATTTGAGCCCAATGGCATGTATCCTTTGATTTATGGTGGGGATGCCCCGAATACTAGAGGAGGTTTTAGAGGGAACACATCCAGGTTTTGCGAAATAAACTCATTGAACCCAAATTTAGTGAAGGGTAAAATTGTCCTTTGCATTGGGCTTGGCGCTGGGTTTAAAGAAGCATGGAGTGCATTCTTGGCAGGTGCCGTTGGGACTGTGATAGTGGATGGACTCCGACTCCCCAAAGATTCCAGCAATATTTATCCCTTGCCTGCATCTCGCCTTAGTGCAGGAGATGGTAAAAGAATTGCCTACTACATCAGCTCAACAAGTAACCCAACTGCATCGATTTTGAAGAGTATTGAGGTTAAGGACACATTGGCCCCATATGTACCCTCCTTCTCATCAAGGGGTCCAAACAATATTACACACGACCTTCTCAAGCCAGATTTAACAGCCCCAGGTGTACACATTCTGGCTGCCTGGTCACCAATTTCTCCAATCTCTCAAATGAGTGGTGATAATCGAGTAGCGCAATACAATATATTAAGCGGCACGTCAATGGCTTGTCCACATGCTACTGGGGCAGCTGCCTACATCAAGTCATTTCACCCCACCTGGTCTCCTGCTGCTATTAAGTCTGCTCTTATGACTACTGCTACTCCCATGAGCGCTAGAAAAAATCCGGAAGCCGAATTTGCATATGGTGCAGGCAATATTGATCCTGTAAGGGCTGTGCACCCTGGTTTAGTGTATGATGCCGATGAGATTGACTTTGTAAATTTTTTGTGTGGAGAAGGCTATAGTATTCAGACTCTACGGAAAGTCACCGGGGATCATAGTGTCTGTTCGAAAGCTACGAATGGAGCCGTTTGGGATCTAAATTACCCGTCCTTTGCTCTTTCCATCCCCTACAAAGAATCAATCGCTCGCACGTTCAAAAGGAGTGTCACAAATGTTGGATTACCAGTATCCACATATAAAGCAACTGTTATTGGTGCCCCAAAGGGACTCAAAATCAACGTTAAACCAAACATTTTATCATTCACATCCATCGGGCAGAAACTATCTTTTGTGTTGAAGGTTGAAGGACGTATAGTTAAAGACATGGTCTCTGCTTCGTTAGTGTGGGATGACGGTTTACATAAAGTGAGGTCCCCCATTATTGTGTATGCAGTCCAATAA 2241 45.69 MARQKNSSLWFLLLSLICSLLSTHSTAAASEDDVRKEYIVYMGAKPAGDFSASAIHTNMLEQVFGSGRASSSLVRSYKRSFNGFVAKLTEDEMQQMKGMDGVVSVFPSEKKQLHTTRSWDFVGFPRQVKRTSFESDIIIGVLDGGIWPESDSFDDKGFGPPPRKWKGTCQGFSNFTCNNKIIGAKYYKSDRKFSPEDLQSPRDSDGHGTHTASTAAGGLVNMASLMGFGLGTARGGVPSARIAVYKICWSDGCDDADILAAFDDAIADGVDIISYSLGNPPSRDYFKDTAAIGAFHAMKNGILTSTSAGNDGPRLVSVVNVAPWSLSVAASTIDRKFLTEVQLGDKKVYKGFSINAFEPNGMYPLIYGGDAPNTRGGFRGNTSRFCEINSLNPNLVKGKIVLCIGLGAGFKEAWSAFLAGAVGTVIVDGLRLPKDSSNIYPLPASRLSAGDGKRIAYYISSTSNPTASILKSIEVKDTLAPYVPSFSSRGPNNITHDLLKPDLTAPGVHILAAWSPISPISQMSGDNRVAQYNILSGTSMACPHATGAAAYIKSFHPTWSPAAIKSALMTTATPMSARKNPEAEFAYGAGNIDPVRAVHPGLVYDADEIDFVNFLCGEGYSIQTLRKVTGDHSVCSKATNGAVWDLNYPSFALSIPYKESIARTFKRSVTNVGLPVSTYKATVIGAPKGLKINVKPNILSFTSIGQKLSFVLKVEGRIVKDMVSASLVWDDGLHKVRSPIIVYAVQ* 747
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 3768029 3771501 + Vvi13g373 Vvi13g373 774159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g373 746 CDD PA_subtilisin_like 341 469 - -
Vvi13g373 746 ProSiteProfiles Serine proteases, subtilase domain profile. 118 598 - -
Vvi13g373 746 SUPERFAMILY Subtilisin-like 120 599 IPR036852 GO:0004252|GO:0006508
Vvi13g373 746 ProSitePatterns Serine proteases, subtilase family, serine active site. 537 547 IPR023828 -
Vvi13g373 746 Pfam Peptidase inhibitor I9 38 114 IPR010259 -
Vvi13g373 746 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 26 743 IPR045051 -
Vvi13g373 746 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 114 IPR037045 -
Vvi13g373 746 Pfam Subtilase family 135 590 IPR000209 GO:0006508|GO:0008236
Vvi13g373 746 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Vvi13g373 746 PRINTS Subtilisin serine protease family (S8) signature 203 216 IPR015500 -
Vvi13g373 746 PRINTS Subtilisin serine protease family (S8) signature 536 552 IPR015500 -
Vvi13g373 746 Gene3D - 615 745 - -
Vvi13g373 746 Gene3D Peptidase S8/S53 domain 136 611 IPR036852 GO:0004252|GO:0006508
Vvi13g373 746 PANTHER PUTATIVE-RELATED 26 743 - -
Vvi13g373 746 CDD Peptidases_S8_3 111 573 IPR034197 -
Vvi13g373 746 Gene3D - 334 476 - -
Vvi13g373 746 Pfam Fibronectin type-III domain 645 742 IPR041469 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g533 Vvi13g373 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g373 - - vvi:100263317 1462.97