Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g374 ATGATGTGGTTCGGTCTCAATACCCTTCTTTCTCCTCTCCCAGCCACTTTTCTCCTAGGCGGCCAGGCCCATCCTTTCTTTTTGCTCTCCCTAGGCACTTTTCTCCGGGGCCCACCGCACCTTTATAAAAAACTTTTTTCTCTGGTTTCTCCTTCTCAGTCTCATTTGCACTTTGTTCTGTACCCACAGTACTACAGCAATATAGATCCTGTGAAGGCTGTAGATCCTGGTCTGGTATATGATGTCGATGAGATTGACTATGTAAAATTTTTGTGCTCATGTGTATATATGTATAGATGTCCAAGCACCACGAAGCGCATAGCTTACCATCATCTAATGGCAAAACAAAAAAACTCCTTTCTGTGGTTTCTCCTTCTCAGTCTCATCTGCAGTCTGCTCAGCACCCACAGTACTGCAGCAGCTTCCGAGGATGATGTTCGAAAGGAGTATATTGTGTACATGGGTGCCAAGCCTGCCGGAGATTTGTCGGCGTCTGCCATTCACACCAACATGCTGGAGCAAGTCTTTGGCAGTGGTAGGGCATCAAGTTCTCTAGTTCGCAGTTACAAAAGGAGTTTCAATGGATTTGTAGCGAAGCTAACAGAGGAGGAAATGCAGCAAATGAAAGGCATGGACGGGGTGGTCTCGGTTTTCCCTAACGAAAAGAAACAGCTCCACACAACTAGGTCGTGGGATTTCGTGGGGTTTCCCCGACAAGTTAAAAGAACAAGTTTTGAAAGCGACATTATCATAGGAGTGCTTGACACTGGAATATGGCCAGAGTCTGACAGCTTCGATGATAAAGGATTTGGCCCACCGCCAAGGAAATGGAAGGGCACTTGCCACGGGTTTTCCAATTTCACTTGCAACAATAAAATTATTGGAGCCAAGTACTATAAGAGCGATGGAAAATTTAGCCCAAAAGATTTGCATTCCCCAAGAGATTCAGAAGGCCATGGGACACACACTGCGTCAACTGCGGCAGGGGATTTAGTCAGCATGGCAAGTCTAATGGGCTTTGGTTTAGGAACCGCACGGGGTGGGGTTCCATCAGCTCGGATAGCTGTGTATAAGACGTGTTGGTCTGATGGCTGTCATGATGCTGATATTCTTGCAGCATTTGATGATGCAATTGCTGATGGGGTTGATATAATATCTATTTCAGTTGGGGGTAAAACTCCCCAGAAATATTTTGAAGATTCTGCTGCAATCGGAGCTTTTCATGCAATGAAAAATGGGATACTAACATCAACTTCTGCTGGTAACGAGGGACCTCTCCTTGTTTCCGTCACAAATGTCTCGCCATGGTCTCTTTCCGTGGCTGCTAGCACCACATATCGGAAGTTCTTGACCAAGGTGCAACTAGGTGACAGGAAGGTTTATAAAGGAATTTCGATAAACACATTTGAGCTCCATGGCATGTATCCTTTGATTTATGGTGGGGATGGCCCGAATACTAGAGGAGGTTTTAGAGGGAACACATCCAGGTTTTGCCAAATAAACTCACTGAACCCAAATTTAGTGAAGGGTAAAATTGTCCTTTGCATTGGGCATCGCGGTGGGTCTGAAGCAGCATGGAGTGCATTCTTGGCAGGTGCCGTTGGGACTGTGATAGTGGATGGACTCCAACTCCCCAGAGATTTCAGCCGCATTTATCCCTTGCCTGCATCTCGCCTTGGTGCAGGAGATGGTAAAAGAATTGCCTACTACATCAGCTCAACAAGTAACCCAACTGCATCGATATTGAAGAGTATTGAGGTTAGTGACACATTGGCCCCATATGTACCCCCCTTCTCATCAAGGGGTCCAAACCCAATTACACACGACCTTCTCAAGCCAGATTTAACAGCCCCAGGTGTACACATTCTGGCTGCCTGGTCACCAATTTCTCCCATCTCTAAGGTACCTGGCGATAATCGAATAGCGGAATACAATATAGAATCCGGCACGTCAATGGCTTGCCCACATGCTACTGGGGCAGCTGCCTACATCAAGTCATTTCACCCCACCTGGTCTCCTGCTGCTATTAAGTCTGCTCTTATGACTACTGCTACTCCCATGAGTGCTAGAAAGAATCCGGAAGCCGAATTTGCATATGGTGCAGGCAATATTGATCCTGTAAGGGCTGTGCACCCTGGTCTAGTGTATGATGCCGATGAGATTGACTTCGTAAATTTTTTGTGCGGAGAAGGATATAGTGTTCAAAATCTACGGCTAGTCACCGGGGATCATAGTGTCTGTTCTAAAGCTACGAATGGAACCGTTTGGGATCTAAATTACCCGTCCTTTGCTCTTTCCATCCCCTACAAAGAATCAATCGCTCGCACGTTCAAAAGGAGTGTCACAAATGTTGGATTACCAGTATCCACATATAAAGCAACTGTTATTGGTGCCCCTAAGGGACTCAAAGTCAACGTTCAACCAAACATTTTATCATTCACATCCATCGGGCAGAAACTATCTTTTGTGTTGAAGGTTAAAGGACGGATAGTTAAAGACATGGTCTCTGCTTCGTTAGTGTGGGATGACGGTTTATATAAAGTGAGATCCCCCATTATTGTGTATGCAGTCCAATAA 2577 45.71 MMWFGLNTLLSPLPATFLLGGQAHPFFLLSLGTFLRGPPHLYKKLFSLVSPSQSHLHFVLYPQYYSNIDPVKAVDPGLVYDVDEIDYVKFLCSCVYMYRCPSTTKRIAYHHLMAKQKNSFLWFLLLSLICSLLSTHSTAAASEDDVRKEYIVYMGAKPAGDLSASAIHTNMLEQVFGSGRASSSLVRSYKRSFNGFVAKLTEEEMQQMKGMDGVVSVFPNEKKQLHTTRSWDFVGFPRQVKRTSFESDIIIGVLDTGIWPESDSFDDKGFGPPPRKWKGTCHGFSNFTCNNKIIGAKYYKSDGKFSPKDLHSPRDSEGHGTHTASTAAGDLVSMASLMGFGLGTARGGVPSARIAVYKTCWSDGCHDADILAAFDDAIADGVDIISISVGGKTPQKYFEDSAAIGAFHAMKNGILTSTSAGNEGPLLVSVTNVSPWSLSVAASTTYRKFLTKVQLGDRKVYKGISINTFELHGMYPLIYGGDGPNTRGGFRGNTSRFCQINSLNPNLVKGKIVLCIGHRGGSEAAWSAFLAGAVGTVIVDGLQLPRDFSRIYPLPASRLGAGDGKRIAYYISSTSNPTASILKSIEVSDTLAPYVPPFSSRGPNPITHDLLKPDLTAPGVHILAAWSPISPISKVPGDNRIAEYNIESGTSMACPHATGAAAYIKSFHPTWSPAAIKSALMTTATPMSARKNPEAEFAYGAGNIDPVRAVHPGLVYDADEIDFVNFLCGEGYSVQNLRLVTGDHSVCSKATNGTVWDLNYPSFALSIPYKESIARTFKRSVTNVGLPVSTYKATVIGAPKGLKVNVQPNILSFTSIGQKLSFVLKVKGRIVKDMVSASLVWDDGLYKVRSPIIVYAVQ* 859
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 3771567 3779738 + Vvi13g374 Vvi13g374 774160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g374 858 SUPERFAMILY Subtilisin-like 225 714 IPR036852 GO:0004252|GO:0006508
Vvi13g374 858 PANTHER PUTATIVE-RELATED 66 97 - -
Vvi13g374 858 PANTHER PUTATIVE-RELATED 138 855 - -
Vvi13g374 858 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 66 97 IPR045051 -
Vvi13g374 858 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 138 855 IPR045051 -
Vvi13g374 858 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 133 226 IPR037045 -
Vvi13g374 858 CDD PA_subtilisin_like 453 581 - -
Vvi13g374 858 ProSitePatterns Serine proteases, subtilase family, serine active site. 649 659 IPR023828 -
Vvi13g374 858 CDD Peptidases_S8_3 223 685 IPR034197 -
Vvi13g374 858 Pfam Subtilase family 247 702 IPR000209 GO:0006508|GO:0008236
Vvi13g374 858 PRINTS Subtilisin serine protease family (S8) signature 246 265 IPR015500 -
Vvi13g374 858 PRINTS Subtilisin serine protease family (S8) signature 315 328 IPR015500 -
Vvi13g374 858 PRINTS Subtilisin serine protease family (S8) signature 648 664 IPR015500 -
Vvi13g374 858 Pfam Peptidase inhibitor I9 150 226 IPR010259 -
Vvi13g374 858 Gene3D Peptidase S8/S53 domain 248 723 IPR036852 GO:0004252|GO:0006508
Vvi13g374 858 Gene3D - 446 588 - -
Vvi13g374 858 ProSiteProfiles Serine proteases, subtilase domain profile. 230 710 - -
Vvi13g374 858 Pfam Fibronectin type-III domain 757 854 IPR041469 -
Vvi13g374 858 Gene3D - 727 857 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g374 - - vvi:109123728 1504.96