Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g375 ATGATAAAGAGGGGAGAATTTGAAACATTTAAGCTGAGGGTATACAATAAAATTTTTTATAGAAAGAGGGTTGGAGGACTCAAGTATGTATCATGTATGTATAAATGTCCAAGCACCACAAAGCGCATAGCTGACCCTACAATGGCAAGACCAAAAAACTCTCGTCTGTGGTTTCTCCTTCTCAGTCTCATCTGCAGTCTGCTCAATACGCACAGCACTGCAGCAGCTTCGGAGGATGATGGTCGAAAGGAGTATATTGTGTACATGGGTGCCAAGCCTGCCGGAGATTTCTCGGCATCTGCCAGTCACACCAACATGCTGCAGCAAGTCTTTGGCAGCAGTAGGGCATCAACTTCTCTGGTCCGCAGTTACAAAAAGAGTTTCAATGGATTTGTAGCGAAGCTAACAGAGGAGGAAATGCAACAAATGAAGGGAATGGATGGGGTGGTCTCGATTTTCCCTAACGAAAAGAAACAGCTCCATACAACTAGGTCCTGGGATTTCGTGGGGTTTCCCCAACAAGTTAAAAGAACGAGTTTTGAAAGCGACATTATCATAGGAATGTTAGACACTGGAATATGGCCGGAGTCTGACAGCTTCGATGATGAAGGATTTGGTCCACCGCCAAGGAAATGGAAGGGCACTTGCCATGGGTTTTCCAATTTCACTTGCAACAATAAAATTATTGGAGCCAAGTACTACCGGAGCGATGGAGAATTTGGCCGAGAAGATTTACGATCCCCAAGAGATTCACTCGGCCATGGGACACACACTGCATCGACTGCGGCTGGGGGCTTAGTTAGCATGGCAAGTCTAATGGGCTTTGGTTTGGGAACTGCACGGGGTGGGGTTCCATCAGCTCGGATAGCTGTGTATAAGATATGTTGGTCTGATGGCTGTCATGGTGCTGATGTTCTTGCAGCATTTGATGACGCAATTGCTGATGGGGTTGATATAATTTCTATTTCAGCTGGGAGTTCCACACCCAGTAATTATTTTGAAGATCCAATTGCAATTGGAGCTTTTCATGCAATGAAGAATGGGATACTAACATCAACTTCTGCTGGTAACGAGGGACCTCGCTTTATTTCCATCACAAATTTCTCCCCATGGTCGCTTTCCGTGGCTGCTAGCACCATAGACCGGAAGTTCTTTACCAAGGTGAAACTAGGTGACAGTAAGGTTTATAAGGGATTTTCGATAAATACATTTGAGCTCAACGACATGTATCCTTTGATTTATGGTGGGGATGCCCCGAATACTAGAGGAGGTTTTAGAGGGAATACATCCAGGTTTTGCAAAATAAAATCATTGAACCCAAATTTAGTGAAGGGTAAAATTGTCTTTTGCGATGGCAAGGGTGGTGGGAAAGCTGCATTCTTGGCAGGTGCCATTGGGACTTTGATGGTGGATAAACTCCCCAAAGGTTTCAGCAGCAGTTTTCCCTTGCCTGCATCTCGCCTTAGTGTAGGAGATGGTAGAAGAATTGCCCACTACATCAATTCAACAAGTGACCCAACTGCATCGATATTGAAGAGTATTGAGGTTAATGACACATTGGCCCCATATGTACCCCCCTTCTCATCAAGGGGTCCAAACCCAATTACACACGACCTTCTCAAGCCGGATCTAACATCCCCAGGTGTACACATTGTGGCTGCCTGGTCACCAATTTCTCCCATCTCTGATGTAAAAGGTGATAATCGAGTAGCGCAGTACAATATAATAACCGGCACGTCAATGGCTTGCCCACATGCTACTGGGGCAGCTGCCTACATCAAGTCATTTCACCCCACCTGGTCTCCTGCCGCTATTAAGTCTGCTCTTATGACCACTGCTACTCCCATGAGCGCTAAAAAAAATCCACAAGTCGAATTTGCATATGGTGCAGGCAATATTGATCCTGTAAAGGCTGTACACCCTGGTCTAGTGTACGATGCCAATGAGATTGACTTCGTAAATTTTTTGTGTGGGCAAGGCTATACTGCTAAGGCTCTGCGGCAAGTCACCGGGGATCATAGTGTCTGTTCTAAAGCTACAAATGGAACCGTTTGGAATCTAAATTATCCTTCCTTTGCTCTTTCCACCTTCAACAAAGAATCTATTGTTGGCACGTTCAACAGGAGTGTCACAAATGTTGGATTAGCCGTGTCCACATATAAAGCAACTATTATTGGTGCCCCAAAAGGACTCAAAATCAAAGTGAAACCAAACATTTTATCATTCACATCCATCGGTCAGAAACAATCCTTTGTGTTGAAGGTTGAAGGACGGATAGTTGAAGACATAGTCTCTACTTCTTTGGTGTGGGATAACGGTGTACATCAGGTGAGGTCACCCATTGTTGTGTATGGCGTCGAATAA 2364 44.84 MIKRGEFETFKLRVYNKIFYRKRVGGLKYVSCMYKCPSTTKRIADPTMARPKNSRLWFLLLSLICSLLNTHSTAAASEDDGRKEYIVYMGAKPAGDFSASASHTNMLQQVFGSSRASTSLVRSYKKSFNGFVAKLTEEEMQQMKGMDGVVSIFPNEKKQLHTTRSWDFVGFPQQVKRTSFESDIIIGMLDTGIWPESDSFDDEGFGPPPRKWKGTCHGFSNFTCNNKIIGAKYYRSDGEFGREDLRSPRDSLGHGTHTASTAAGGLVSMASLMGFGLGTARGGVPSARIAVYKICWSDGCHGADVLAAFDDAIADGVDIISISAGSSTPSNYFEDPIAIGAFHAMKNGILTSTSAGNEGPRFISITNFSPWSLSVAASTIDRKFFTKVKLGDSKVYKGFSINTFELNDMYPLIYGGDAPNTRGGFRGNTSRFCKIKSLNPNLVKGKIVFCDGKGGGKAAFLAGAIGTLMVDKLPKGFSSSFPLPASRLSVGDGRRIAHYINSTSDPTASILKSIEVNDTLAPYVPPFSSRGPNPITHDLLKPDLTSPGVHIVAAWSPISPISDVKGDNRVAQYNIITGTSMACPHATGAAAYIKSFHPTWSPAAIKSALMTTATPMSAKKNPQVEFAYGAGNIDPVKAVHPGLVYDANEIDFVNFLCGQGYTAKALRQVTGDHSVCSKATNGTVWNLNYPSFALSTFNKESIVGTFNRSVTNVGLAVSTYKATIIGAPKGLKIKVKPNILSFTSIGQKQSFVLKVEGRIVEDIVSTSLVWDNGVHQVRSPIVVYGVE* 788
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 3792128 3800105 + Vvi13g375 Vvi13g375 774161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g375 787 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 73 784 IPR045051 -
Vvi13g375 787 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 68 161 IPR037045 -
Vvi13g375 787 PANTHER PUTATIVE-RELATED 73 784 - -
Vvi13g375 787 CDD Peptidases_S8_3 158 614 IPR034197 -
Vvi13g375 787 Gene3D Peptidase S8/S53 domain 183 652 IPR036852 GO:0004252|GO:0006508
Vvi13g375 787 ProSiteProfiles Serine proteases, subtilase domain profile. 165 639 - -
Vvi13g375 787 Gene3D - 656 786 - -
Vvi13g375 787 SUPERFAMILY Subtilisin-like 160 643 IPR036852 GO:0004252|GO:0006508
Vvi13g375 787 ProSitePatterns Serine proteases, subtilase family, serine active site. 578 588 IPR023828 -
Vvi13g375 787 Pfam Peptidase inhibitor I9 85 161 IPR010259 -
Vvi13g375 787 PRINTS Subtilisin serine protease family (S8) signature 181 200 IPR015500 -
Vvi13g375 787 PRINTS Subtilisin serine protease family (S8) signature 250 263 IPR015500 -
Vvi13g375 787 PRINTS Subtilisin serine protease family (S8) signature 577 593 IPR015500 -
Vvi13g375 787 CDD PA_subtilisin_like 388 510 - -
Vvi13g375 787 Pfam Fibronectin type-III domain 686 783 IPR041469 -
Vvi13g375 787 Gene3D - 381 517 - -
Vvi13g375 787 Pfam Subtilase family 182 631 IPR000209 GO:0006508|GO:0008236
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g535 Vvi13g375 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g375 - - vvi:109123728 1274.23