Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g377 ATGGGGGATCTTCCGAAGGGTGGTGCTCTCTCCTTATCATCTTTCCACACTAATATGCTACAAGAAGTCGTCGGCAGTAGTAGTGCATCCAAATATTTACTCCACAGCTACAAGAAGAGCTTCAATGGATTTGTTGCGGAATTAACCAAGGAGGAGATGAAGAGACTGTCTGCCATGAAGGGGGTAGTGTCTGTGTTCCCAAATGAAAAGAAGCAACTCCTAACAACAAGGTCATGGGACTTCATGGGCTTCCCCCAAAAGGCTACAAGAAATACTACTGAAAGCGATATTGTTGTTGGAGTGCTCGATAGTGGGATCTGGCCTGAGTCTGCAAGTTTCAACGATAAAGGATTTGGTCCACCACCAAGCAAATGGAAGGGCACTTGTGATAGCTCAGCCAATTTCACTTGCAACAATAAAATCATTGGAGCTAGATACTACCGAAGTAGTGGAAGTATACCAGAAGGAGAGTTTGAATCAGCAAGAGATGCTAATGGCCATGGCACACACACTGCATCCACAGCCGCTGGAGGCATAGTTGATGATGCAAGCTTGCTAGGCGTTGCCTCAGGAACAGCTAGAGGAGGGGTTCCCTCTGCCCGCATTGCAGTGTACAAGATATGTTGGTCTGATGGTTGCTTCAGTGCAGATATCCTTGCAGCATTTGATGATGCAATTGCTGATGGAGTTGATATTATCTCTCTCTCTGTTGGAGGATCCTCTCCCAATGATTACTTCCGAGACCCAATTGCTATTGGAGCTTTCCATTCTATGAAGAATGGGATTCTTACATCTAATTCTGCTGGTAATTCAGGTCCTGATCTTGCATCTATTACAAATTTCTCGCCTTGGTCTCTCTCTGTCGCTGCAAGTACCATTGACAGAAAGTTTTTGACCAAGTTAGTGTTGGGTGACAACCAGGTTTATGAGGATTCAATCTCTCTTAATACTTTCAAGATGGAGGATATGCTCCCTATCATTTATGCTGGAGATGCACCAAATAAGGCAGGAGGTTTCACTGGGTCTGAATCCAGGTACTGCTACGAGGACTCCTTGGACAAGTCTCTGGTAACTGGAAAAATAGTATTATGTGACGAGACTAGTCAAGGACAGGCGGTACTGGCTGCCGGAGCAGCCGGTACCATAATTCCAGATGATGGCAACGAGGGGAGAACTTTTTCTTTCCCTGTACCTACATCCTGCTTGGACACAAGTAATATTAGCAAAATTCAGCAGTACATGAACTCAGCTAGCAATCCTACTGCAAAAATAGAGAGGTCCATGGCCGTGAAAGAAGAATCGGCCCCAATTGTAGCTTTATTTTCATCTAGGGGGCCCAACCCCATTACAAGTGACATTCTCAGTCCCGACATAACTGCACCGGGAGTTCAAATTCTAGCAGCATGGGCAGAAGCTTCACCTTTGACTGATGTACCAGGGGATGAAAGAGTAGCTAAATACAACATAATTTCAGGCACGTCCATGTCTTGCCCGCATGCTTCTGGGGCTGCCGCCTACGTCAAATCATTTCATCCAACATGGTCTCCTGCTGCTATCAAGTCTGCTTTAATGACAACTGCTACTCCCATGAATGTTAAAACTAACACCGATCTGGAGTTTGCATACGGGGCGGGTCATCTAAATCCTGTAAAGGCTGCAAATCCTGGTTTAGTGTATGATGCTGGAGCGGCAGATTACGTCAAATTTTTGTGTGGGCAAGGATATAGCACTGAGAACTTGAGGCTCATCACTGGAGATAGCAGCACTTGCACAAAAGCCACAAACGGGACTGTTTGGGATTTGAACTATCCTTCTTTTGCTCTATCTATTAGTGCTGGAGAAACCGTTACGCGCACTTTCACCAGGACGGTCACGAATGTTGGATCACCAGTCTCCACTTACAAGGTAAAAGTGACTGCCCCACCAGGACTCACGGTTAAAGTTGAGCCACCTGTCCTTACATTCAAGTCCGTCGGCCAGAGGCAGACCTTCACTGTCACAGCTACTGCAGCAGGCAATGAAAGTATTCTATCAGGGTCTTTGGTGTGGGATGATGGGGTTTTTCAAGTAAGAAGCCCCATTGTTGCTTTTGCTCCTGCATTTAAAAGAAGAGATGGTCAACGAGGTTGCATGACCTATGCACAACGACTGCGTTTTGATACCATGAAAACTTTGGATGCAATGACAAAACTCGTGTGTTTTATTCTGTCATTATGTCTGTCTATATATACAAAAGAAAGCTATTGTAAAACATAA 2256 45.21 MGDLPKGGALSLSSFHTNMLQEVVGSSSASKYLLHSYKKSFNGFVAELTKEEMKRLSAMKGVVSVFPNEKKQLLTTRSWDFMGFPQKATRNTTESDIVVGVLDSGIWPESASFNDKGFGPPPSKWKGTCDSSANFTCNNKIIGARYYRSSGSIPEGEFESARDANGHGTHTASTAAGGIVDDASLLGVASGTARGGVPSARIAVYKICWSDGCFSADILAAFDDAIADGVDIISLSVGGSSPNDYFRDPIAIGAFHSMKNGILTSNSAGNSGPDLASITNFSPWSLSVAASTIDRKFLTKLVLGDNQVYEDSISLNTFKMEDMLPIIYAGDAPNKAGGFTGSESRYCYEDSLDKSLVTGKIVLCDETSQGQAVLAAGAAGTIIPDDGNEGRTFSFPVPTSCLDTSNISKIQQYMNSASNPTAKIERSMAVKEESAPIVALFSSRGPNPITSDILSPDITAPGVQILAAWAEASPLTDVPGDERVAKYNIISGTSMSCPHASGAAAYVKSFHPTWSPAAIKSALMTTATPMNVKTNTDLEFAYGAGHLNPVKAANPGLVYDAGAADYVKFLCGQGYSTENLRLITGDSSTCTKATNGTVWDLNYPSFALSISAGETVTRTFTRTVTNVGSPVSTYKVKVTAPPGLTVKVEPPVLTFKSVGQRQTFTVTATAAGNESILSGSLVWDDGVFQVRSPIVAFAPAFKRRDGQRGCMTYAQRLRFDTMKTLDAMTKLVCFILSLCLSIYTKESYCKT* 752
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 3808858 3821300 - Vvi13g377 Vvi13g377 774163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g377 751 Gene3D Peptidase S8/S53 domain 96 566 IPR036852 GO:0004252|GO:0006508
Vvi13g377 751 Pfam Fibronectin type-III domain 600 695 IPR041469 -
Vvi13g377 751 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 73 IPR037045 -
Vvi13g377 751 CDD PA_subtilisin_like 301 424 - -
Vvi13g377 751 PRINTS Subtilisin serine protease family (S8) signature 94 113 IPR015500 -
Vvi13g377 751 PRINTS Subtilisin serine protease family (S8) signature 163 176 IPR015500 -
Vvi13g377 751 PRINTS Subtilisin serine protease family (S8) signature 491 507 IPR015500 -
Vvi13g377 751 ProSitePatterns Serine proteases, subtilase family, serine active site. 492 502 IPR023828 -
Vvi13g377 751 Pfam Subtilase family 95 545 IPR000209 GO:0006508|GO:0008236
Vvi13g377 751 Gene3D - 294 431 - -
Vvi13g377 751 PANTHER PUTATIVE-RELATED 1 698 - -
Vvi13g377 751 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 698 IPR045051 -
Vvi13g377 751 ProSiteProfiles Serine proteases, subtilase domain profile. 78 553 - -
Vvi13g377 751 CDD Peptidases_S8_3 71 528 IPR034197 -
Vvi13g377 751 Pfam Peptidase inhibitor I9 15 72 IPR010259 -
Vvi13g377 751 Gene3D - 570 698 - -
Vvi13g377 751 SUPERFAMILY Subtilisin-like 78 554 IPR036852 GO:0004252|GO:0006508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g377 - - vvi:100256451 1377.46