Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g378 ATGAAATTTAGGAATCACTCTTTGACTACAAAGATCGAGAGGCAGATGATCCGTCCCTCTTCTTGGCCTTGTTGCCATGTCTTTTTATATTTTGTTCTTTCAGATCTGAAAGATTCTTTTGCCAATTTGTGGTTGCAGGTCTATATCGTGTACATGGGTAATCTTCCAAAGGGCGGTGCTCTCTCCATATCGTCTTTCCACACTAACATGCTGCAAGAAGTCGTCGGCAGTAGTAGTGCATCCAAATATTTACTCCGCAGCTACAAGAGGAGCTTCAATGGATTTGTTGCGGAATTGACCAGGGAGGAGATGAAGAGACTGTCTGCCATGAAGGGGGTAGTGTCTGTGTTCCCAAATGAAAAGAAGCAACTCCTAACAACAAGGTCATGGGACTTCATGGGCTTCCCCCAGAAAGTTACAAGAAATACTACTGAAAGCGATATTGTTGTTGGAATGCTCGATAGTGGGATCTGGCCTGAGTCTGCAAGTTTTAGCGATAAAGGATTTGGTCCACCACCAAGCAAATGGAAGGGCACTTGTGAAACCTCAACCAATTTCACTTGCAACAATAAAATCATTGGAGCTAGATACTACCGAAGTAGTGGTAGTGTACCAGAAGGAGAGTTTGAATCAGCAAGAGATGCTAATGGCCATGGCACACACACTGCATCCACAGCCGCTGGAGGCATAGTTGATGATGCAAGCTTGCTAGGCGTTGCCTCAGGAACAGCTAGAGGAGGGGTTCCCTCTGCCCGCATTGCAGTGTACAAGATATGTTGGTCTGATGGTTGCTTCAGTGCAGATATCCTTGCAGCATTTGATGATGCAATTGCTGATGGAGTTGATATTATCTCTCTCTCTGTTGGAGGATCCTCTCCCAATGATTACTTCCGAGACCCAATTGCTATTGGAGCTTTCCATTCTATGAAGAATGGGATTCTTACATCTAATTCTGCTGGTAATTCAGGTCCTGATCTTGCATCTATTACAAATTTCTCGCCTTGGTCTCTCTCTGTCGCTGCAAGTACCATTGACAGAAAGTTTTTGACCAAGTTGGTGTTGGGTGACAACCAGGTTTATGAGGATTCAATCTCTCTAAATACTTTTAAGATGAAGGATATGCACCCTATCATTTATGCTGGAGATGCACCAAATAGGGCAGGAGGTTTCACTGGGTCTGAATCCAGGCTTTGCACTGATGACTCCTTGGACAAGTCTCTGGTAACTGGAAAAATAGTATTCTGTGATGGGTCTAGTCGTGGACAGGCGGTACTGGCTGCCGGTGCAGCCGGTACTATAATTCCAGATGAAGGCAACGAGGGGAGAACTTTTTCTTTTCCTGTACCTACATCCTGCTTGGACACAAGTGATACAAGCAAAATTCAGCAGTACATGAACTCAGCTAGCAACGCCACTGCAAAAATAGAGAGGTCCATCGCCGTGAAAGAAGAATCGGCCCCAATTGTAGCTTCATTTTCATCTAGGGGCCCCAACCCCGTTACAACTGACATTCTCAGTCCCGACATAACTGCACCGGGAGTTCAAATTCTAGCAGCATGGACAGAAGCTTCACCTTTGACAGATGTACCAGGGGATAAAAGAGTAGCTAAATATAACATAATTTCAGGCACGTCCATGTCTTGCCCACATGCTTCTGGGGCTGCCGCCTACGTCAAATCATTTCATCCAACATGGTCTCCTGCTGCTATCAAGTCTGCTTTAATGACAACTGCTACTCCCATGAATGTTAAAACTAACACCGATCTGGAGTTCGCATACGGGGCGGGTCATCTAAATCCTGTAAAGGCTAGAAATCCTGGTCTAGTGTATGATACTGGAGCGGCAGATTACATCAAATTTTTGTGTGGACAAGGCTATAGCACTGAGAACTTGCGGCTTATCACGGGAGATGACAGTAGTTGCACAAAAGCCACAAATGGGACCGTTTGGGATTTGAACTATCCTTCTTTTACCCTAACTACTAGGGATGGAAAAACTGTTACGCGCACTTTTGCCAGGACAGTGACCAATGTTGGATCAGCAGTCTCAACTTACAAGGTAAAAGTGACTGCCTCTCCCGGACTCACTGTCAAAGTTGAACCAAGTGTCCTTTCATTCAAGTCCCTTGGCCAGAAGAAGACCTTCACCGTCACGGCTACGGCAGCAGGCGATGAACTTAAGCTAACTGGGTCTTTGGTCTGGGATGATGGGGGCGCTTTGGGTCAATTTCCTATAAAAGGTAGCTTGCATCAAAATACAAGCACTGTCACCTCAAGATTCTGGGACTATCCCCTTCCAGTGGGCAATATGGCAGTTCGATGCATGCAAATGTATATTGTGTACATGGGTGACCTTCCAAAAGGTCAAGTGTCGGTGTCATCCCTTCACGCTAACATGCTACAAGAAGTCACCGGCAGTAGTGCGTCTGAATATCTTCTCCATAGCTACAAGAGGAGCTTCAACGGGTTTGTCGCAAAGTTGACGGAGGAGGAGTCGAAGAAACTGTCCAGCATGGACGGGGTTGTGTCTGTGTTCCCAAATGGAAAGAAGAAACTCCTTACGACAAGGTCATGGGACTTCATCGGCTTCCCAGTTGAAGCTAATAGAACAACTACTGAAAGTGACATTATTGTTGGAATGCTGGACACTGGGATCTGGCCTGAGTCTGCTAGTTTCAGTGATGAAGGGTATGGCCCACCACCAACCAAATGGAAGGGCACTTGTCAAACCTCGTCCAATTTCACTTGCAACAATAAAATTATTGGAGCTAAATACTACCGGAGTGATGGAAAAGTACCTCGAAGGGATTTTCCATCACCAAGAGATTCAGAAGGCCATGGATCACACACTGCATCCACAGCAGCTGGAAACTTAGTTGGTGGGGCAAGCTTACTGGGCATTGGCACAGGAACAGCTCGAGGAGGGGCTCCTTCAGCCCGCATTTCAGTGTATAAGATATGTTGGGCAGATGGTTGTTATGACGCTGATATCCTGGCAGCATTTGATGATGCAATCGCCGATGGAGTTGATGTAATCTCTCTTTCTGTTGGGGGATTCTCTCCATTGGATTACTTTGAAGACTCAATTGCAATTGGAGCTTTCCATTCCATGAAGAGTGGGATACTCACATCTAATTCTGCTGGTAATTCGGGCCCAGATGCTGCTTCCATTACAAATTTCTCGCCTTGGTCTCTGTCAGTTGCTGCTAGCGTCATTGACAGAAAGTTTGTGACCCCCCTGCATTTGGGAAACAACCAGACTTATGGAGTACTCTCTTTAAATACTTTCGAAATGAATGATATGGTTCCTCTCATTTATGGTGGAGATGCGCCAAACACGTCAGCAGGTTATGATGGATCTTCTTCCAGGTACTGCTACGAGGATTCCTTGGACAAGTCTCTGGTAACTGGTAAAATTGTACTCTGTGATGAGTTGAGTCTTGGGGTCGGAGCATTGAGTGCTGGAGCAGTAGGTACTGTAATGCCACATGAAGGCAATACGGAATATTCCTTCAATTTCCCCATAGCTGCATCCTGCTTGGACTCCGTCTATACTAGCAATGTTCATGAGTACATAAACTCAACTAGCACACCAACCGCAAATATACAGAAGACCACCGAGGCCAAAAATGAATTGGCACCATTTGTAGTTTCGTTTTCGTCGAGGGGCCCAAACCCTATTACCCGTGACATTCTCAGTCCTGACATCGCCGCGCCAGGAGTTGACATTCTAGCAGCATGGACAGGAGCTTCAAGTTTGACAGGAGTTCCAGGGGATACAAGAGTAGTTCCGTACAATATCATTTCAGGGACGTCCATGGCTTGTCCACATGCTTCCGGGGCTGCTGCCTACGTCAAATCATTTCACCCAACATGGTCTCCTTCTGCTATCAAGTCTGCCATAATGACAACTGCTTCTCCCATGAGTGTTGAAACCAACACCGACCTGGAGTTTGCATATGGGGCAGGTCAGTTAAATCCCCTACAGGCTGCAAATCCTGGTTTGGTATATGATGCTGGAGCAGCAGATTACATCAAGTTTTTGTGTGGGCAAGGCTATAACGATACAAAGTTGCAGCTTATCACCGGAGACAACAGCACTTGCTCTGCAGCCACAAATGGAACTGTTTGGGATTTAAACTACCCTTCTTTTGCTGTATCTACTGAGCATGGGGCAGGTGTTATTCGCAGCTTCACTAGAACTGTCACAAACGTCGGATCACCGGTCTCAACTTACAAGGCAATTGTGCTTGGCCCTCCAGAACTCAGTATCCGAGTTGAACCAGGTGTACTTTCATTCAAATCCCTTGGAGAGACGCAAACCTTCACCAAGGAAGGTGGTAGGGAAGCGTTTTTGGACAAGGAGAATGGTGACAAAAAAGCGAAAGAGGGAGAAATAATGACGCCATCAAAATATAAAAGTAAATATTTATATTTATCTATACATAATTTTAAGATAGTGAATAATAAAATATATATAATTATTGAAATATGA 4494 45.42 MKFRNHSLTTKIERQMIRPSSWPCCHVFLYFVLSDLKDSFANLWLQVYIVYMGNLPKGGALSISSFHTNMLQEVVGSSSASKYLLRSYKRSFNGFVAELTREEMKRLSAMKGVVSVFPNEKKQLLTTRSWDFMGFPQKVTRNTTESDIVVGMLDSGIWPESASFSDKGFGPPPSKWKGTCETSTNFTCNNKIIGARYYRSSGSVPEGEFESARDANGHGTHTASTAAGGIVDDASLLGVASGTARGGVPSARIAVYKICWSDGCFSADILAAFDDAIADGVDIISLSVGGSSPNDYFRDPIAIGAFHSMKNGILTSNSAGNSGPDLASITNFSPWSLSVAASTIDRKFLTKLVLGDNQVYEDSISLNTFKMKDMHPIIYAGDAPNRAGGFTGSESRLCTDDSLDKSLVTGKIVFCDGSSRGQAVLAAGAAGTIIPDEGNEGRTFSFPVPTSCLDTSDTSKIQQYMNSASNATAKIERSIAVKEESAPIVASFSSRGPNPVTTDILSPDITAPGVQILAAWTEASPLTDVPGDKRVAKYNIISGTSMSCPHASGAAAYVKSFHPTWSPAAIKSALMTTATPMNVKTNTDLEFAYGAGHLNPVKARNPGLVYDTGAADYIKFLCGQGYSTENLRLITGDDSSCTKATNGTVWDLNYPSFTLTTRDGKTVTRTFARTVTNVGSAVSTYKVKVTASPGLTVKVEPSVLSFKSLGQKKTFTVTATAAGDELKLTGSLVWDDGGALGQFPIKGSLHQNTSTVTSRFWDYPLPVGNMAVRCMQMYIVYMGDLPKGQVSVSSLHANMLQEVTGSSASEYLLHSYKRSFNGFVAKLTEEESKKLSSMDGVVSVFPNGKKKLLTTRSWDFIGFPVEANRTTTESDIIVGMLDTGIWPESASFSDEGYGPPPTKWKGTCQTSSNFTCNNKIIGAKYYRSDGKVPRRDFPSPRDSEGHGSHTASTAAGNLVGGASLLGIGTGTARGGAPSARISVYKICWADGCYDADILAAFDDAIADGVDVISLSVGGFSPLDYFEDSIAIGAFHSMKSGILTSNSAGNSGPDAASITNFSPWSLSVAASVIDRKFVTPLHLGNNQTYGVLSLNTFEMNDMVPLIYGGDAPNTSAGYDGSSSRYCYEDSLDKSLVTGKIVLCDELSLGVGALSAGAVGTVMPHEGNTEYSFNFPIAASCLDSVYTSNVHEYINSTSTPTANIQKTTEAKNELAPFVVSFSSRGPNPITRDILSPDIAAPGVDILAAWTGASSLTGVPGDTRVVPYNIISGTSMACPHASGAAAYVKSFHPTWSPSAIKSAIMTTASPMSVETNTDLEFAYGAGQLNPLQAANPGLVYDAGAADYIKFLCGQGYNDTKLQLITGDNSTCSAATNGTVWDLNYPSFAVSTEHGAGVIRSFTRTVTNVGSPVSTYKAIVLGPPELSIRVEPGVLSFKSLGETQTFTKEGGREAFLDKENGDKKAKEGEIMTPSKYKSKYLYLSIHNFKIVNNKIYIIIEI* 1498
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 3821846 3838396 + Vvi13g378 Vvi13g378 774164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g378 1497 Pfam Fibronectin type-III domain 1378 1443 IPR041469 -
Vvi13g378 1497 Pfam Fibronectin type-III domain 651 739 IPR041469 -
Vvi13g378 1497 ProSiteProfiles Serine proteases, subtilase domain profile. 129 604 - -
Vvi13g378 1497 Pfam Subtilase family 146 596 IPR000209 GO:0006508|GO:0008236
Vvi13g378 1497 Pfam Subtilase family 874 1323 IPR000209 GO:0006508|GO:0008236
Vvi13g378 1497 Gene3D - 621 748 - -
Vvi13g378 1497 Gene3D - 1348 1467 - -
Vvi13g378 1497 CDD Peptidases_S8_3 850 1306 IPR034197 -
Vvi13g378 1497 CDD PA_subtilisin_like 352 475 - -
Vvi13g378 1497 PRINTS Subtilisin serine protease family (S8) signature 145 164 IPR015500 -
Vvi13g378 1497 PRINTS Subtilisin serine protease family (S8) signature 214 227 IPR015500 -
Vvi13g378 1497 PRINTS Subtilisin serine protease family (S8) signature 542 558 IPR015500 -
Vvi13g378 1497 CDD PA_subtilisin_like 1082 1202 - -
Vvi13g378 1497 Gene3D - 345 482 - -
Vvi13g378 1497 Gene3D - 1073 1209 - -
Vvi13g378 1497 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 36 742 IPR045051 -
Vvi13g378 1497 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 766 1450 IPR045051 -
Vvi13g378 1497 ProSiteProfiles Serine proteases, subtilase domain profile. 857 1331 - -
Vvi13g378 1497 Gene3D Peptidase S8/S53 domain 147 617 IPR036852 GO:0004252|GO:0006508
Vvi13g378 1497 Gene3D Peptidase S8/S53 domain 875 1344 IPR036852 GO:0004252|GO:0006508
Vvi13g378 1497 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 37 124 IPR037045 -
Vvi13g378 1497 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 770 852 IPR037045 -
Vvi13g378 1497 SUPERFAMILY Subtilisin-like 852 1335 IPR036852 GO:0004252|GO:0006508
Vvi13g378 1497 MobiDBLite consensus disorder prediction 931 954 - -
Vvi13g378 1497 Pfam Peptidase inhibitor I9 778 849 IPR010259 -
Vvi13g378 1497 Pfam Peptidase inhibitor I9 47 123 IPR010259 -
Vvi13g378 1497 ProSitePatterns Serine proteases, subtilase family, serine active site. 1270 1280 IPR023828 -
Vvi13g378 1497 CDD Peptidases_S8_3 122 579 IPR034197 -
Vvi13g378 1497 ProSitePatterns Serine proteases, subtilase family, serine active site. 543 553 IPR023828 -
Vvi13g378 1497 PANTHER PUTATIVE-RELATED 766 1450 - -
Vvi13g378 1497 PANTHER PUTATIVE-RELATED 36 742 - -
Vvi13g378 1497 SUPERFAMILY Subtilisin-like 129 605 IPR036852 GO:0004252|GO:0006508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g378 - - gra:105775705 1595.87