Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g380 ATGCCCACAGAAGGGCAAGTCAAACTCAATTTACCAGGATTACATCATGGGGATAAATTTTTCAAAGGTTTGGGAAAAAAAATGGAACTTCAGATGGAAAATGCCTCCCAATATCTCCTCCATAGCTACAAGAAGAGCTTCAACGGATTTGTCGCAAAGTTGACCGAGGAGGAGTCGAAGAAACTGTCCGGCATGGACGGGGTTGTGTCTGTGTTCCCAAATGGAAAGAAGAAACTCCTTACCACAAGGTCGTGGGACTTCATCGGCTTTCCCCTGGAAGCTAATAGAACAACTACTGAAAGTGACATTATTGTTGGAATGCTGGACACTGGGATCTGGCCTGAGGCTGATAGTTTCAGTGATGAAGGGTATGGTCCACCACCAACCAAATGGCAGGGCACTTGTCAAACCTCATCCAATTTCACCTGCAACAATAAAATCATTGGAGCTAGATACTACAGGAGTGATGGAAATGTACCCCCAGAAGATTTTGCATCACCAAGAGATACAGAAGGCCATGGGACACATACTGCATCCACAGCAGCTGGAAACGTAGTTAGTGGGGCAAGCTTACTGGGCCTTGGCGCAGGAACAGCTCGAGGAGGGACTCCTTCAGCCCGCATTGCAGTGTATAAGATATGTTGGGCAGATGGTTGTTATGATGCAGATATCCTTGCAGCATTTGATGATGCAATTGCGGATGGAGTTAATATTATCTCTCTTTCAGTTGGGGGATCCTTTCCTCTGGATTACTTTGAAGATTCAATTGCGATTGGAGCCTTCCATTCCATGAAGAATGGGATACTCACATCTAATGCTGGTGGTAATTCGGGTCCAGATCCTGGTTCAATTACAAATTTCTCGCCTTGGTCTCTCTCAGTTGCTGCTAGCGTCATTGACAGAAAGTTTCTGACCGCGTTGCACTTAGGAAACAACCTGACTTATGAGGGAGAACTCTCTCTAAATACTTTCGAGATGAATGGTATGGTCCCTCTCATTTATGGCGGGGATGCGCCAAACACGTCAGCAGGATCTGATGCATCTTATTCCAGGTACTGCTACGAGGGCACCTTGAACACGTCTCTGGTAACGGGTAAAATTGTATTCTGTGACCAGTTGAGTGATGGGGTGGGAGCAATGAGTGCTGGAGCAGTAGGTACTGTAATGCCAAGTGATGGCTACACAGATTTGTCCTTAGCTTTCCCCTTACCTACATCCTGCTTGGACTCCAACTATACTACCAACGTTCATGAGTACATCAACTCAACTAGCACACCAACCGCAAATATACAGAAGAGCACCGAGGCTAAAAATGAATTGGCACCGTTTGTAGTTTGGTTTTCGTCGAGGGGCCCAAACCCTATTACCCGTGACATTCTCAGTCCTGACATCGCCGCGCCAGGAGTTAATATTCTAGCAGCATGGACAGAAGCTTCAAGTTTGACAGGAGTTCCAGGGGATACAAGAGTAGTTCCATACAATATCATTTCAGGGACGTCCATGGCTTGTCCACATGCTTCCGGGGCTGCTGCCTACGTTAAATCATTTAACCCAACATGGTCTCCTGCTGCTATCAAGTCTGCCTTAATGACAACTGCTTCACCCTTGAGTGCTGAAACCAACACCGACCTGGAGTTTTCTTATGGGGCTGGTCAGTTGAATCCCCTACAGGCTGCAAATCCTGGTTTGGTGTATGATGCTGGGGAGGCAGATTACATCAAGTTCTTGTGTGGACAAGGCTATAACACTACAAAGTTGCACCTTGTCACGGGAGAAAACATCACTTGTTCTGCTGCCACAAATGGAACTGTTTGGGATTTAAACTACCCTTCTTTTGCTATATCCACTGAGCATGAGGCAGGAGTTAATCGCACCTTCACTAGAACTGTCACAAACGTCGGATCACCAGTCTCAACTTACAAGGCAATTGTGGTTGGCCCTCCAGAGTTCAGTATCAAAGTTGAACCAGGTGTACTTTCATTCAAATCCCTTGGGGAGACGCAAACCTTCACCGTCACTGTTGGTGTGGCAGCACTAAGTAACCCTGTAATATCAGGCTCTTTGGTGTGGGATGATGGGGTTTACAAAGTGAGGAGCCCCATAGTTGCTTATGTTTTTTAG 2121 46.39 MPTEGQVKLNLPGLHHGDKFFKGLGKKMELQMENASQYLLHSYKKSFNGFVAKLTEEESKKLSGMDGVVSVFPNGKKKLLTTRSWDFIGFPLEANRTTTESDIIVGMLDTGIWPEADSFSDEGYGPPPTKWQGTCQTSSNFTCNNKIIGARYYRSDGNVPPEDFASPRDTEGHGTHTASTAAGNVVSGASLLGLGAGTARGGTPSARIAVYKICWADGCYDADILAAFDDAIADGVNIISLSVGGSFPLDYFEDSIAIGAFHSMKNGILTSNAGGNSGPDPGSITNFSPWSLSVAASVIDRKFLTALHLGNNLTYEGELSLNTFEMNGMVPLIYGGDAPNTSAGSDASYSRYCYEGTLNTSLVTGKIVFCDQLSDGVGAMSAGAVGTVMPSDGYTDLSLAFPLPTSCLDSNYTTNVHEYINSTSTPTANIQKSTEAKNELAPFVVWFSSRGPNPITRDILSPDIAAPGVNILAAWTEASSLTGVPGDTRVVPYNIISGTSMACPHASGAAAYVKSFNPTWSPAAIKSALMTTASPLSAETNTDLEFSYGAGQLNPLQAANPGLVYDAGEADYIKFLCGQGYNTTKLHLVTGENITCSAATNGTVWDLNYPSFAISTEHEAGVNRTFTRTVTNVGSPVSTYKAIVVGPPEFSIKVEPGVLSFKSLGETQTFTVTVGVAALSNPVISGSLVWDDGVYKVRSPIVAYVF* 707
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 3862364 3865381 + Vvi13g380 Vvi13g380 774166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g380 706 MobiDBLite consensus disorder prediction 158 180 - -
Vvi13g380 706 Pfam Subtilase family 101 551 IPR000209 GO:0006508|GO:0008236
Vvi13g380 706 Gene3D - 300 437 - -
Vvi13g380 706 PRINTS Subtilisin serine protease family (S8) signature 100 119 IPR015500 -
Vvi13g380 706 PRINTS Subtilisin serine protease family (S8) signature 169 182 IPR015500 -
Vvi13g380 706 PRINTS Subtilisin serine protease family (S8) signature 497 513 IPR015500 -
Vvi13g380 706 CDD Peptidases_S8_3 77 534 IPR034197 -
Vvi13g380 706 Pfam Peptidase inhibitor I9 32 76 IPR010259 -
Vvi13g380 706 SUPERFAMILY Subtilisin-like 85 560 IPR036852 GO:0004252|GO:0006508
Vvi13g380 706 CDD PA_subtilisin_like 309 430 - -
Vvi13g380 706 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 79 IPR037045 -
Vvi13g380 706 PANTHER PUTATIVE-RELATED 31 704 - -
Vvi13g380 706 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 704 IPR045051 -
Vvi13g380 706 ProSitePatterns Serine proteases, subtilase family, serine active site. 498 508 IPR023828 -
Vvi13g380 706 Gene3D Peptidase S8/S53 domain 102 572 IPR036852 GO:0004252|GO:0006508
Vvi13g380 706 ProSiteProfiles Serine proteases, subtilase domain profile. 84 559 - -
Vvi13g380 706 Gene3D - 576 705 - -
Vvi13g380 706 Pfam Fibronectin type-III domain 606 702 IPR041469 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g380 - - vvi:100244417 1329.31