Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g45 ATGGCACATTATTACAACATTGATGAAATTATTGTAGAGGAAGAGCTCGTCTCTGCTGTGTTCCAAAAAGCGGCAAATGGAGTTGGAATCCTTGATCCTAGTGCTGAAACAAACAGTGTTGAACAAGGTTCAAAGGTAGAGCTGCCCTTCTGGCTTGCTCATGAGTTACTCCAGAGACAAGCAGTGACAATTCATGTTCCTGCCTGTTTCAATCAAAAAACCAGGAAGGAAATCCAAGCAGATGCTCCATGTGTGGATCTAAGGAGCCGATGTCCATATTTCTATGAACTGGGGTGCAAGGTAGCCCCATTGGTTGGTGATAGAACCATTGGATCCTTGCTCCTTCAGGCCTTTTTGAGCAGGTACAAGGAAGTTTTGAGCAAGGCACATACAGCTGCATCCACACCGGTTCCCAAAGTCTTGACACTTCTAACAAAAGAAGAAACCAATTTGTATGAGACAGCCCAATCCTCTATGGCAGCATTTAAGAAATGGCGGATGGGTGGACCCAGATTCCAGAGAGCTTCTGTTCTTGGGAGGAAGAGGAAACCAACTGATTAG 561 45.1 MAHYYNIDEIIVEEELVSAVFQKAANGVGILDPSAETNSVEQGSKVELPFWLAHELLQRQAVTIHVPACFNQKTRKEIQADAPCVDLRSRCPYFYELGCKVAPLVGDRTIGSLLLQAFLSRYKEVLSKAHTAASTPVPKVLTLLTKEETNLYETAQSSMAAFKKWRMGGPRFQRASVLGRKRKPTD* 187
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 488152 492447 + Vvi13g45 Vvi13g45 773831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g45 186 SUPERFAMILY GINS helical bundle-like 66 167 IPR036224 -
Vvi13g45 186 CDD GINS_A_psf3 62 168 - -
Vvi13g45 186 PANTHER UNCHARACTERIZED 1 185 IPR010492 -
Vvi13g45 186 Gene3D - 2 167 IPR038437 -
Vvi13g45 186 SUPERFAMILY PriA/YqbF domain 2 67 - -
Vvi13g45 186 Pfam GINS complex protein 46 148 IPR021151 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g45 K10734 - vvi:100253648 373.244