Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g490 ATGGCTGATGAACTTGAAGAGCGTAGTTTGGAGGAAACGCCTACTTGGGCTGTTGCAGTGGTCTGCTTTGTGTTGCTTGCTGTTTCGATCTTCATCGAACATATTTTTCATCTTATTGGATCGTGGTTAAAAGGCAGACACAGGCGAGCCCTTTATGAATCTCTGGAAAAGATCAAAGCAGAGCTTATGCTGTTGGGAGTCATATCCTTGCTGCTTACAATATTACAAGATTACATTTCAAAGATATGCATTTCTGAGAGTGTTGGGTCCACTTGGCACCCTTGTAAAAAGGAAACCAAAGATTTTAAGAACACATGCTCTGAGGGAAAAGTCCCATTAGTGTCTTCCTATGGGATCCATCAACTCCATATATTCATCTTTGTGTTAGCTCTCTTTCATGTGATTTACTGTGTGGCCACCTTGGCTTTGGGAAGAACCAAGATGAGAAGATGGAAGGCTTGGGAGGATCAAACTAAGACGATTGAATATCAATACTCTCATGATCCAGAGAGGTTTAGGTTTGCAAGGGATACATCCTTTGGGCGCAGGCATTTGAATTTCTGGAGCCGCTCTCCTGTTCTCCTCTGGATTGTCTGCTTCTTCAGACAATTCTTCAGATCGGTTAACAACGTTGACTATCTTACATTAAGACATGGATTTATCATGGCACATTTGTCACCTGGAAGTGAAACAAAATTTGATTTCCGAAATTACATCAAAAGATCGCTTGAAGAGGACTTCAAAGTTGTAGTGAGCATCAGCCCAGTAATATGGTTCTGTGCAGTATTGTTCCTACTCACCAACACACATGGGTGGTATTCTTACTTGTGGCTTCCATTCATCCCCTTAGTTATAATACTCTTGGTGGGAACAAAGCTTCAAGTGATCATAACCAAACTGGGATTGAGGATTGCAGAGAGAGGTGATGTGGTGAAGGGTACACCAGTAGTTGAGCCAGCCAACGACCTCTTCTGGTTCAATCGCCCTCACCTCATCCTCTTTCTGATCAACTTTGTTCTCTTCCTGAATGCATTTCAGCTGGCTTTCTTCGCATGGAGCACGTATGAGTTTGGGCTGCAATCTTGCTATCACCAAAAGACAGAAGACATTGCCATCAGAATCTCAATGGGGGTCATCACACAGGTACTATGCAGTTATGTGACACTCCCACTCTATGCCTTGGTGACACAGATGGGCTCCACCATGAGACCGACAATTTTTAACGAGAGAGTGGCCACGGCTCTAAGAAGCTGGCACCAGGCGGCCAGGAAGCACACAAAACATGGGCGCCACTCGAATGGTGTGTCCCCACAGTCGAGTAGGCCAGCGACTCCATCATATGGGATGTCCCCTGTTCATCTATTGCAAGGCTACCACAACCACACTCCTGATATGTCTCCAAGACGATCAAACTTGGACAACGAATGGTATGGGGAAGGAGCAGGGTCTCCAGGGAAGAAGGATGATGATGAGCATGAAAAGGAGAAATTTGAATCCAGAGAGCAGGGACAAGGGATTGGAGACTCGAGCTCAACCCAACTGCCCCTTGGACCCCGCCCAATCCGAACCCAACATGAGATCAACATTACTTTATCGGATTTCTCATTTGCAAAGCGCTGA 1620 45.37 MADELEERSLEETPTWAVAVVCFVLLAVSIFIEHIFHLIGSWLKGRHRRALYESLEKIKAELMLLGVISLLLTILQDYISKICISESVGSTWHPCKKETKDFKNTCSEGKVPLVSSYGIHQLHIFIFVLALFHVIYCVATLALGRTKMRRWKAWEDQTKTIEYQYSHDPERFRFARDTSFGRRHLNFWSRSPVLLWIVCFFRQFFRSVNNVDYLTLRHGFIMAHLSPGSETKFDFRNYIKRSLEEDFKVVVSISPVIWFCAVLFLLTNTHGWYSYLWLPFIPLVIILLVGTKLQVIITKLGLRIAERGDVVKGTPVVEPANDLFWFNRPHLILFLINFVLFLNAFQLAFFAWSTYEFGLQSCYHQKTEDIAIRISMGVITQVLCSYVTLPLYALVTQMGSTMRPTIFNERVATALRSWHQAARKHTKHGRHSNGVSPQSSRPATPSYGMSPVHLLQGYHNHTPDMSPRRSNLDNEWYGEGAGSPGKKDDDEHEKEKFESREQGQGIGDSSSTQLPLGPRPIRTQHEINITLSDFSFAKR* 540
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 5335059 5339133 + Vvi13g490 Vvi13g490 774276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g490 539 PANTHER MLO-LIKE PROTEIN 1 107 535 IPR004326 GO:0006952|GO:0016021
Vvi13g490 539 PANTHER MLO-LIKE PROTEIN 1 1 108 IPR004326 GO:0006952|GO:0016021
Vvi13g490 539 PANTHER MLO-LIKE PROTEIN 107 535 - -
Vvi13g490 539 PANTHER MLO-LIKE PROTEIN 1 108 - -
Vvi13g490 539 MobiDBLite consensus disorder prediction 422 526 - -
Vvi13g490 539 MobiDBLite consensus disorder prediction 482 502 - -
Vvi13g490 539 Pfam Mlo family 7 101 IPR004326 GO:0006952|GO:0016021
Vvi13g490 539 Pfam Mlo family 102 458 IPR004326 GO:0006952|GO:0016021
Vvi13g490 539 MobiDBLite consensus disorder prediction 503 518 - -
Vvi13g490 539 MobiDBLite consensus disorder prediction 432 446 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi8g593 Vvi13g490 ECH
Vvi6g292 Vvi13g490 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g490 K08472 - vvi:100233060 1049.27